-Genomic Data Links
Protein
Myb
UniPROBE Accession Number
UP00092
Species
Mus musculus
Domain
SANT
Name and Synonyms
myeloblastosis oncogene
AI550390, c-myb, C-myb, M16449, MGC18531, Myb proto-oncogene protein
Description
Mus musculus myeloblastosis oncogene (Myb)
-PBM Motif Data for Myb
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
AACCGTTA E.S. 0.495
TAACGGTT E.S. 0.495
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
CAACTGCC E.S. 0.491
GGCAGTTG E.S. 0.491
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH1047)
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PWM
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Consensus
GTKDACGDNN
NNHCGTHMAC
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1047)
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PWM
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Consensus
HAACGGHHNN
NNDDCCGTTD
Downloads
Download the zip of all Myb PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Myb in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=92&sourceDB=uniprobe

-Myb Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH1047 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH1047 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH1047 insert sequence
1    HDYDGLLPKS GKRHLGKTRW TREEDEKLKK LVEQNGTDDW KVIANYLPNR
51   TDVQCQHRWQ KVLNPELIKG PWTKEEDQRV IELVQKYGPK RWSVIAKHLK
101  GRIGKQCRER WHNHLNPEVK KTSWTEEEDR IIYQAHKRLG NRWAEIAKLL
151  PGRTDNAIKN HWNSTMRRKV EQEGYLQEPS KAS

DNA Binding Domains (Pfam) for clone 1047
Region 17..63
1   KTRWTREEDE KLKKLVEQNG TDDWKVIANY LPNRTDVQCQ HRWQKVL

Region 69..115
1   KGPWTKEEDQ RVIELVQKYG PKRWSVIAKH LKGRIGKQCR ERWHNHL

Region 121..166
1   KTSWTEEEDR IIYQAHKRLG NRWAEIAKLL PGRTDNAIKN HWNSTM
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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