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| -Genomic Data |
Links |
- Protein
- Myb
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- UniPROBE Accession Number
- UP00092
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- Species
- Mus musculus
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- Domain
- SANT
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- Uniprot
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P06876
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- Name and Synonyms
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myeloblastosis oncogene
AI550390, c-myb, C-myb, M16449, MGC18531, Myb proto-oncogene protein
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- IHOP
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122996
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- RefSeq
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NP_034978
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- Description
- Mus musculus myeloblastosis oncogene (Myb)
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- JASPAR
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MA0100
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| -PBM Motif Data for Myb |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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AACCGTTA E.S. 0.495
TAACGGTT E.S. 0.495
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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CAACTGCC E.S. 0.491
GGCAGTTG E.S. 0.491
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH1047)
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- PWM
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View
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- Consensus
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GTKDACGDNN
NNHCGTHMAC
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1047)
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- PWM
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View
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- Consensus
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HAACGGHHNN
NNDDCCGTTD
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- Downloads
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Download the
zip
of all Myb PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Myb
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=92&sourceDB=uniprobe
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| -Myb Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1047 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2016-03-24 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1047 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2016-03-24 |
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- Clone pTH1047 insert sequence
- 1 HDYDGLLPKS GKRHLGKTRW TREEDEKLKK LVEQNGTDDW KVIANYLPNR
51 TDVQCQHRWQ KVLNPELIKG PWTKEEDQRV IELVQKYGPK RWSVIAKHLK
101 GRIGKQCRER WHNHLNPEVK KTSWTEEEDR IIYQAHKRLG NRWAEIAKLL
151 PGRTDNAIKN HWNSTMRRKV EQEGYLQEPS KAS
- DNA Binding Domains (Pfam) for clone 1047
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Region 17..63
1 KTRWTREEDE KLKKLVEQNG TDDWKVIANY LPNRTDVQCQ HRWQKVL
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Region 69..115
1 KGPWTKEEDQ RVIELVQKYG PKRWSVIAKH LKGRIGKQCR ERWHNHL
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Region 121..166
1 KTSWTEEEDR IIYQAHKRLG NRWAEIAKLL PGRTDNAIKN HWNSTM
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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