-Genomic Data Links
Protein
Mtf1
UniPROBE Accession Number
UP00097
Species
Mus musculus
Domain
zf-C2H2
Name and Synonyms
metal response element binding transcription factor 1
metalloregulatory transcription factor, Metal-regulatory transcription factor 1, metal response element-binding transcription factor 1, MRE-binding transcription factor, Mtf-1, Transcription factor MTF-1
Description
Metal response element binding transcription factor 1
-PBM Motif Data for Mtf1
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
CGTGTGCA E.S. 0.495
TGCACACG E.S. 0.495
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
ATA.GAAA.A E.S. 0.403
T.TTTC.TAT E.S. 0.403
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH2377)
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PWM
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Consensus
SGDGYGCANN
NNTGCRCHCS
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2377)
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PWM
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Consensus
NNNNNNRNNN
NNNYNNNNNN
Downloads
Download the zip of all Mtf1 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Mtf1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=97&sourceDB=uniprobe

-Mtf1 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2377 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2377 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH2377 insert sequence
1    LQSECPETKR KEVKRYQCTF EGCPRTYSTA GNLRTHQKTH RGEYTFVCNQ
51   EGCGKAFLTS YSLRIHVRVH TKEKPFECDV RGCEKAFNTL YRLKAHQRLH
101  TGKTFNCESQ GCSKYFTTLS DLRKHIRTHT GEKPFRCDHD GCGKAFAASH
151  HLKTHVRTHT GERPFFCPSN GCEKTFSTQY SLKSHMKGHD NKGTAYSALP
201  QHNG

DNA Binding Domains (Pfam) for clone 2377
Region 16..40
1   YQCTFEGCPR TYSTAGNLRT HQKTH

Region 46..70
1   FVCNQEGCGK AFLTSYSLRI HVRVH

Region 76..100
1   FECDVRGCEK AFNTLYRLKA HQRLH

Region 105..129
1   FNCESQGCSK YFTTLSDLRK HIRTH

Region 135..159
1   FRCDHDGCGK AFAASHHLKT HVRTH

Region 165..189
1   FFCPSNGCEK TFSTQYSLKS HMKGH
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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