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| -Genomic Data for HLH-30 |
Links |
- Gene
- hlh-30
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- Species
- $species
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- Domain
- bHLH
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- IHOP
-
None Available
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- Swiss-Prot
-
P91527
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- UniPROBE Accession Number
- $accession_id
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- Synonyms
- None Available
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- $refseq_designator
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AAB37997
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- Wormbase Protein ID
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WP:CE14416
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- EdgeDB Promoter
- Phlh-30
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- Wormbase Gene ID
-
WBGene00020930
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- Description (from Wormbase)
- W02C12.3 is orthologous to the human gene TRANSCRIPTION FACTOR BINDING TO IGHM ENHANCER 3 (TFE3; OMIM:314310), which when mutated leads to disease.
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| -PBM Motif Data for HLH-30 |
- PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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- PWM
<dd><a href="./downloads/Cell09/HLH-30/HLH-30.pwm">View</a>   <a href="downfile.php?id=365&gene=HLH-30&folder=Cell09&RC=0">Save</a></dd>
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- Top Kmer
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TCACGTGA E.S. 0.498
TCACGTGA E.S. 0.498
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- Downloads
-
Download the
zip
of all HLH-30 PBM files
or view the
downloads directory
for individual files.
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| -HLH-30 Datasets |
| Gene |
Homodimerizes |
Clone Type |
Last Modified |
Save |
View |
|
hlh-30
|
Yes |
Full length clone |
2016-03-24 |
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- HLH-30 Insert Sequence
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1 ADDDDRVDIS NETLASLVGR PMSSSGNRIR ATPSRRRLVS APTNPRWSPS
51 ADDRRLFSYV SSMRSDSNSS SKSPSPPSAK MSKRPNGPYS VRKYQPRGSP
101 PSDGSDKIHR FGESPTPGGV GGVFGTELDD LIIDELMGME DDQRMRPGAT
151 RPMTIGGEKT MSMARPIPGA SSRAGSGHSG SPITIPNAMS NNFRQVVSSS
201 APTSSIDIEK MIGAVSNGGG NSGGDNDPED YYRDRRKKDI HNMIERRRRY
251 NINDRIKELG QMLPKNTSED MKLNKGTILK ASCDYIRVLQ KDREQAMKTQ
301 QQQKSLESTA HKYADRVKEL EEMLARQGVQ VPPSHLPPIP KVIERPIKQE
351 IDESPPNHTP TGSFVSSSGF LSEVTNNTAA MQITSPNDSR PNNFMNNSAP
401 SDSFFSVGSA SPPDYRTSSG TASWKLPGSN AFSDLMMDDL NPMMNGDPLI
451 SSAGAHPSPH FHSSQMSPDI HWDASGFSPD PINTQQSNSG HYHMDFS
- Mutations away from WormBase HLH-30 wildtype:
- • Methioinine start not included in insert sequence
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