-Genomic Data for NTL6 Links
Protein
NTL6
UniPROBE Accession Number
UP00576
Species
Arabidopsis thaliana
Domain
NAC
Swiss-Prot
Q9SCK6
Name and Synonyms
Name: transcription factor NTL6.
Synonyms:None Available
IHOP
9462
NCBI Acc.
NM_114813
Description
Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:20156199, PubMed:19947982). Transcriptional activator involved in response to cold stress. Mediates induction of pathogenesis-related (PR) genes independently of salicylic signaling in response to cold. Binds directly to the PR gene promoters and enhances plant
JASPAR
None Available
-PBM Motif Data for NTL6
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
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Top Kmer
ACACGCAA E.S. 0.497
TTGCGTGT E.S. 0.497
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
GTAAGGAA E.S. 0.483
TTCCTTAC E.S. 0.483
Downloads
Download the zip of all NTL6 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-NTL6 Datasets
Clone Clone Type Last Modified Save View
NTL6 DNA binding domain only 2016-03-24 search save
NTL6 Insert Sequence
1    MNQNLHVLSM DSLPVGLRFR PTDEELIRYY LRRKINGHDD DVKAIREIDI
51   CKWEPWDLPD FSVIKTKDSE WLYFCPLDRK YPSGSRQNRA TVAGYWKATG
101  KDRKIKSGKT NIIGVKRTLV FHAGRAPRGT RTNWIIHEYR ATEDDLSGTN
151  PGQSPFVICK LFKKEELV


References
Data are analyzed by array designs with AMADID #s 034149, 034150 in Lindemose et al, Nucleic Acids Res. 2014


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