-Genomic Data Links
Protein
Prrx2
UniPROBE Accession Number
UP00136
Species
Mus musculus
Domain
Homeobox
Name and Synonyms
paired related homeobox 2
Homeobox protein S8, Paired mesoderm homeobox protein 2, Prx2, PRX-2, S8
Description
None Available
Prrx2 DNA binding domain
1   RRNRTTFNSS QLQALERVFE RTHYPDAFVR EELARRVNLS EARVQVWFQN
51  RRAKFRR
-PBM Motif Data for Prrx2
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
CTAATTAG (E.S. 0.49954)
CTAATTAG (E.S. 0.49954)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNNNATYWNN
NNWRATNNNN
Downloads
Download the zip of all Prrx2 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Prrx2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=136&sourceDB=uniprobe

-Prrx2 Datasets
Clone ID Expression Expression Method Save View
pTH3072 #1 IVT save search
Clone pTH3072 insert sequence
1   GDCPSPGRGT KRKKKQRRNR TTFNSSQLQA LERVFERTHY PDAFVREELA
51  RRVNLSEARV QVWFQNRRAK FRRNERAMLA TRSASLLKSY GQE

References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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