-Genomic Data Links
Protein
Uncx4.1
UniPROBE Accession Number
UP00142
Species
Mus musculus
Domain
Homeobox
Uniprot
Q78DU3
Name and Synonyms
Unc4.1 homeobox (C. elegans)
None Available
IHOP
125828
Description
None Available
RefSeq
NP_038730
Uncx4.1 DNA binding domain
1   RRTRTNFTGW QLEELEKAFN ESHYPDVFMR EALALRLDLV ESRVQVWFQN
51  RRAKWRK
JASPAR
None Available
-PBM Motif Data for Uncx4.1
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
TTAATTAA (E.S. 0.49953)
TTAATTAA (E.S. 0.49953)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNNHNATTAN
NTAATNDNNN
Downloads
Download the zip of all Uncx4.1 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Uncx4.1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=142&sourceDB=uniprobe
-Uncx4.1 Datasets
Clone ID Expression Expression Method Save View
pTH2281 #1 E. coli save search
Clone pTH2281 insert sequence
1   LADSGDPDKE SPGCKRRRTR TNFTGWQLEE LEKAFNESHY PDVFMREALA
51  LRLDLVESRV QVWFQNRRAK WRKKENTKKG PGRPAHNSHP TTC
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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