-Genomic Data Links
Protein
Arx
UniPROBE Accession Number
UP00152
Species
Mus musculus
Domain
Homeobox
Uniprot
O35085
Name and Synonyms
aristaless related homeobox gene (Drosophila)
Aristaless-related homeobox, Homeobox protein ARX
IHOP
119560
Description
None Available
RefSeq
NP_031518
Arx DNA binding domain
1   RRYRTTFTSY QLEELERAFQ KTHYPDVFTR EELAMRLDLT EARVQVWFQN
51  RRAKWRK
JASPAR
None Available
-PBM Motif Data for Arx
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
CTAATTAG (E.S. 0.49949)
CTAATTAG (E.S. 0.49949)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNTAATTDNN
NNHAATTANN
Downloads
Download the zip of all Arx PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Arx in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=152&sourceDB=uniprobe
-Arx Datasets
Clone ID Expression Expression Method Save View
pTH1738 #1 E. coli save search
Clone pTH1738 insert sequence
1   LSAGSDSEEG LLKRKQRRYR TTFTSYQLEE LERAFQKTHY PDVFTREELA
51  MRLDLTEARV QVWFQNRRAK WRKREKAGAQ THPPGLPFPG PLS
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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