-Genomic Data Links
Protein
En1
UniPROBE Accession Number
UP00167
Species
Mus musculus
Domain
Homeobox
Uniprot
P09065
Name and Synonyms
engrailed 1
En-1, engrailed-1, Homeobox protein engrailed-1, Mo-en.1, Mo-En-1
IHOP
120795
Description
None Available
RefSeq
NP_034263
En1 DNA binding domain
1   KRPRTAFTAE QLQRLKAEFQ ANRYITEQRR QTLAQELSLN ESQIKIWFQN
51  KRAKIKK
JASPAR
MA0027
-PBM Motif Data for En1
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
AA.TAATTA (E.S. 0.49812)
TAATTA.TT (E.S. 0.49812)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNNNTYNNNN
NNNNRANNNN
Downloads
Download the zip of all En1 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for En1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=167&sourceDB=uniprobe
-En1 Datasets
Clone ID Expression Expression Method Save View
pTH3123 #1 E. coli save search
Clone pTH3123 insert sequence
1   GPRTRKLKKK KNEKEDKRPR TAFTAEQLQR LKAEFQANRY ITEQRRQTLA
51  QELSLNESQI KIWFQNKRAK IKKATGIKNG LALHLMAQGL YNH
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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