-Genomic Data Links
Protein
Barx1
UniPROBE Accession Number
UP00181
Species
Mus musculus
Domain
Homeobox
Uniprot
Q9ER42
Name and Synonyms
BarH-like homeobox 1
Homeobox protein BarH-like 1
IHOP
119648
Description
None Available
RefSeq
NP_031552
Barx1 DNA binding domain
1   RRSRTVFTEL QLMGLEKRFE KQKYLSTPDR IDLAESLGLS QLQVKTWYQN
51  RRMKWKK
JASPAR
None Available
-PBM Motif Data for Barx1
Primary Motif  (Seed-and-Wobble)
Image Not Available. We apologize for the inconvenience.
Primary PWM
View       Save
Top Kmer
G.TAATTA.C (E.S. 0.49623)
G.TAATTA.C (E.S. 0.49623)
Primary Motif  (BEEML-PBM)
Image Not Available. We apologize for the inconvenience.
Primary PWM
View
Consensus
NNHNRTTANN
NNTAAYNDNN
Downloads
Download the zip of all Barx1 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Barx1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=181&sourceDB=uniprobe
-Barx1 Datasets
Clone ID Expression Expression Method Save View
pTH2877 #1 IVT save search
Clone pTH2877 insert sequence
1   LEAAGSGEPG AKAKKGRRSR TVFTELQLMG LEKRFEKQKY LSTPDRIDLA
51  ESLGLSQLQV KTWYQNRRMK WKKIVLQGGG LESPTKPKGR PKK
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


Supported Browsers:IE 7.0.6001.18000, Firefox 3.5.11, Google Chrome 5.0.375.125 beta