-Genomic Data Links
Protein
Lhx8
UniPROBE Accession Number
UP00184
Species
Mus musculus
Domain
Homeobox
Uniprot
O35652
Name and Synonyms
LIM homeobox protein 8
L3, Lhx7, LIM/homeobox protein Lhx8, LIM homeodomain Lhx7
IHOP
122524
Description
None Available
RefSeq
NP_034843
Lhx8 DNA binding domain
1   KRARTSFTAD QLQVMQAQFA QDNNPDAQTL QKLAERTGLS RRVIQVWFQN
51  CRARHKK
JASPAR
None Available
-PBM Motif Data for Lhx8
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
CTAATTAG (E.S. 0.49710)
CTAATTAG (E.S. 0.49710)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNYMATYANN
NNTRATKRNN
Downloads
Download the zip of all Lhx8 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Lhx8 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=184&sourceDB=uniprobe
-Lhx8 Datasets
Clone ID Expression Expression Method Save View
pTH2247 #1 E. coli save search
Clone pTH2247 insert sequence
1   EGALLTEQDV NHPKPAKRAR TSFTADQLQV MQAQFAQDNN PDAQTLQKLA
51  ERTGLSRRVI QVWFQNCRAR HKKHVSPNHS SSAPVTAVPS SRL
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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