-Genomic Data Links
Protein
Pou2f2
UniPROBE Accession Number
UP00191
Species
Mus musculus
Domain
Homeobox, POU
Uniprot
Q00196
Name and Synonyms
POU domain, class 2, transcription factor 2
Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2, MGC124154, MGC124155, MGC124156, Oct2, Oct-2, Oct2a, Oct2b, Octamer-binding transcription factor 2, Otf2, Otf-2, OTF-2
IHOP
123675
Description
None Available
RefSeq
NP_035268
Pou2f2 DNA binding domain
1   RKKRTSIETN VRFALEKSFL ANQKPTSEEI LLIAEQLHME KEVIRVWFCN
51  RRQKEKR
JASPAR
None Available
-PBM Motif Data for Pou2f2
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
ATGCAAAT (E.S. 0.49683)
ATTTGCAT (E.S. 0.49683)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNNATTANNN
NNNTAATNNN
Downloads
Download the zip of all Pou2f2 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Pou2f2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=191&sourceDB=uniprobe
-Pou2f2 Datasets
Clone ID Expression Expression Method Save View
pTH3748 #1 E. coli save search
Clone pTH3748 insert sequence
1    SHPQPPKCLE PPSHPEEPSD LEELEQFART FKQRRIKLGF TQGDVGLAMG
51   KLYGNDFSQT TISRFEALNL SFKNMCKLKP LLEKWLNDAE TMSVDSSLPS
101  PNQLSSPSLG FDGLPGRRRK KRTSIETNVR FALEKSFLAN QKPTSEEILL
151  IAEQLHMEKE VIRVWFCNRR QKEKRINPCS AAPMLPSPGK PTSYS
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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