-Genomic Data Links
Protein
Obox2
UniPROBE Accession Number
UP00239
Species
Mus musculus
Domain
Homeobox
Uniprot
Q8VHG7
Name and Synonyms
oocyte specific homeobox 2
None Available
IHOP
155888
Description
None Available
RefSeq
NP_663754
Obox2 DNA binding domain
1   RKERTVYTKE EQGLLQKHFD ECQYPNKKKI VELALSVGVT KREIKIWFKN
51  NRAKYRQ
JASPAR
None Available
-PBM Motif Data for Obox2
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
GGGGATTA (E.S. 0.49686)
TAATCCCC (E.S. 0.49686)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNNNSHNNNN
NNNNDSNNNN
Downloads
Download the zip of all Obox2 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Obox2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=239&sourceDB=uniprobe
-Obox2 Datasets
Clone ID Expression Expression Method Save View
pTH3438 #1 E. coli save search
Clone pTH3438 insert sequence
1   DKYVNKQTSP MASRKFRKER TVYTKEEQGL LQKHFDECQY PNKKKIVELA
51  LSVGVTKREI KIWFKNNRAK YRQMNLQNIE QALPESNGSS KAV
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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