-Genomic Data Links
Protein
Esx1
UniPROBE Accession Number
UP00251
Species
Mus musculus
Domain
Homeobox
Uniprot
Q9Z2U3
Name and Synonyms
extraembryonic, spermatogenesis, homeobox 1
None Available
IHOP
120874
Description
None Available
RefSeq
NP_031983
Esx1 DNA binding domain
1   RRYRICFTPI QLQELEAFFQ RVQYPDLFAR VELARRLGLP EPRVQVWFQN
51  RRAKWRR
JASPAR
None Available
-PBM Motif Data for Esx1
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
CTAATTAG (E.S. 0.49886)
CTAATTAG (E.S. 0.49886)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNHDATTANN
NNTAATHDNN
Downloads
Download the zip of all Esx1 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Esx1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=251&sourceDB=uniprobe
-Esx1 Datasets
Clone ID Expression Expression Method Save View
pTH3124 #1 E. coli save search
Clone pTH3124 insert sequence
1   EEEQPGEEQP QQEPKPRRYR ICFTPIQLQE LEAFFQRVQY PDLFARVELA
51  RRLGLPEPRV QVWFQNRRAK WRRLRRAQAF RNMVPVAMSP PVG
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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