-Genomic Data Links
Protein
Dbx1
UniPROBE Accession Number
UP00255
Species
Mus musculus
Domain
Homeobox
Uniprot
P52950
Name and Synonyms
developing brain homeobox 1
AI426026, Dbx, Homeobox protein DBX1, Mmox C
IHOP
120412
Description
None Available
RefSeq
NP_001005232
Dbx1 DNA binding domain
1   MLRRAVFSDV QRKALEKTFQ KQKYISKPDR KKLASKLGLK DSQVKIWFQN
51  RRMKWRN
JASPAR
None Available
-PBM Motif Data for Dbx1
Primary Motif  (Seed-and-Wobble)
Image Not Available. We apologize for the inconvenience.
Primary PWM
View       Save
Top Kmer
A..AATTAAT (E.S. 0.47762)
ATTAATT..T (E.S. 0.47762)
Primary Motif  (BEEML-PBM)
Image Not Available. We apologize for the inconvenience.
Primary PWM
View
Consensus
NNNNNNNNNN
NNNNNNNNNN
Downloads
Download the zip of all Dbx1 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Dbx1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=255&sourceDB=uniprobe
-Dbx1 Datasets
Clone ID Expression Expression Method Save View
pTH3486 #1 IVT save search
Clone pTH3486 insert sequence
1   GTFSWPLAAR GKPRRGMLRR AVFSDVQRKA LEKTFQKQKY ISKPDRKKLA
51  SKLGLKDSQV KIWFQNRRMK WRNSKERELL SSGGCREQTL PTK
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


Supported Browsers:IE 7.0.6001.18000, Firefox 3.5.11, Google Chrome 5.0.375.125 beta