-Genomic Data Links
Protein
Lhx4
UniPROBE Accession Number
UP00261
Species
Mus musculus
Domain
Homeobox
Uniprot
P53776
Name and Synonyms
LIM homeobox protein 4
Gsh4, Gsh-4, LIM/homeobox protein Lhx4
IHOP
122521
Description
None Available
RefSeq
NP_034842
Lhx4 DNA binding domain
1   KRPRTTITAK QLETLKNAYK NSPKPARHVR EQLSSETGLD MRVVQVWFQN
51  RRAKEKR
JASPAR
None Available
-PBM Motif Data for Lhx4
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
CTAATTAG (E.S. 0.49773)
CTAATTAG (E.S. 0.49773)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNDATTRNNN
NNNYAATHNN
Downloads
Download the zip of all Lhx4 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Lhx4 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=261&sourceDB=uniprobe
-Lhx4 Datasets
Clone ID Expression Expression Method Save View
pTH1719 #1 E. coli save search
Clone pTH1719 insert sequence
1   EDYETAKQND DSEAGAKRPR TTITAKQLET LKNAYKNSPK PARHVREQLS
51  SETGLDMRVV QVWFQNRRAK EKRLKKDAGR HRWGQFYKSV KRS
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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