|
|
| -Genomic Data for CEP3 |
Links |
- Protein
- CEP3
|
- UniPROBE Accession Number
- UP00278
|
- Species
- Saccharomyces cerevisiae
|
- Domain
- Zn2Cys6
|
- Uniprot
- P40969
|
- Synonyms
- CBF3, CBF3B, Centromere DNA-binding protein complex CBF3 subunit B, Centromere protein 3, CSL1, YM8520.17C, YMR168C
|
- IHOP
- 35303
|
- RefSeq
- NP_013891
|
- Description
- Essential kinetochore protein, component of the CBF3 complex that binds the CDEIII region of the centromere; contains an N-terminal Zn2Cys6 type zinc finger domain, a C-terminal acidic domain, and ...
|
- SGD
-
YMR168C
|
| -PBM Motif Data |
- Primary Motif (Seed-and-Wobble)
-
|
- Primary PWM
-
View
Save
|
- Top Kmer
-
TTCGGAAA E.S. 0.486
TTTCCGAA E.S. 0.486
|
- Primary Motif (BEEML-PBM) (AMADID # 015681)
-
|
- Primary PWM
-
View
|
- Consensus
-
NNNNNNNNNN
NNNNNNNNNN
|
- Downloads
-
Download the
zip
of all Cep3 PBM files
or view the
downloads directory
for individual files.
|
- Link to TFBSshape
-
This link will take you to the corresponding entry for Cep3
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID278&sourceDB=uniprobe
|
| -Annotations |
- Target Gene Functional Category Enrichment
-
1) FunSpec analysis run with p<0.005 without Bonferroni correction
(view)
-
2) FunSpec analysis run with p<0.05 with Bonferroni correction
(view)
|
- Conditional Specificity
-
1) Specific conditions (view)
-
2) Condition categories (view)
|
| -CEP3 Datasets |
| Clone ID |
Clone Type |
Last Modified |
Save |
View |
|
y1072
|
DNA binding domain only |
2014-07-16 |
|
|
- Insert sequence
- 1 FNRTTQLKSK HPCSVCTRRK VKCDRMIPCG NCRKRGQDSE CMKSTKLITA
51 SSSKEYLPDL LLFWQNYEYW ITNIGLYKTK QRDLTRTPAN LDTDTEECMF
|
|