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| -Genomic Data for PDR1 |
Links |
- Protein
- PDR1
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- UniPROBE Accession Number
- UP00290
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- Species
- Saccharomyces cerevisiae
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- Domain
- Zn2Cys6
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- Uniprot
- P12383
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- Synonyms
- AMY1, ANT1, BOR2, CYH3, NRA2, Pleiotropic drug resistance protein 1, SMR2, TIL1, TPE1, TPE3, Transcription factor PDR1, YGL013C
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- IHOP
- 33188
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- RefSeq
- NP_011502
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- Description
- Zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance ...
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- SGD
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YGL013C
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| -PBM Motif Data |
- Primary Motif (Seed-and-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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TTCCGGAA E.S. 0.472
TTCCGGAA E.S. 0.472
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- Primary Motif (BEEML-PBM) (AMADID # 015681)
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- Primary PWM
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View
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- Consensus
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NNNNNNNNNN
NNNNNNNNNN
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- Downloads
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Download the
zip
of all Pdr1 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Pdr1
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID290&sourceDB=uniprobe
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| -Annotations |
- Target Gene Functional Category Enrichment
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1) FunSpec analysis run with p<0.005 without Bonferroni correction
(view)
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2) FunSpec analysis run with p<0.05 with Bonferroni correction
(view)
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- Conditional Specificity
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1) Specific conditions (view)
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2) Condition categories (view)
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| -PDR1 Datasets |
| Clone ID |
Clone Type |
Last Modified |
Save |
View |
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y1057
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DNA binding domain only |
2014-07-16 |
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- Insert sequence
- 1 MGFSGKIRKP RSKVSKACDN CRKRKIKCNG KFPCASCEIY SCECTFSTRQ
51 GGARIKNLHK TSLEGTTVQV KEETDSSSTS FSNPQRCTDG PCAVEQPTKF
101 FENFKLGGRS SGDNSGSDGK NDDDVNRNGF YEDDSESQAT LTSLQTTLKN
151 LKEMAHLGTH VTSAIESIEL QISDLLKRWE PKVRTKELAT TKFYPNKSIE
201 TQLMKNKYCD VVHLTRYAAW SNNKKDQDTS SQPLIDEIFG LYSPFQFLSL
251 QGIGKCFQNY RSKSKCEIFP RTAKETIYIM LRFFDVCFHH INQGCVSIAN
301 PLENYLQKMN LLPSTPSSIS SAGSPNTAHT KSHVALVINH LPQPFVRNIT
351 GISNSELLSE MNNDISMFGI LLKMLDMHKN SYQNFLMEIT SNPSVAKNTQ
401 SIDVLQEFIH YCQAGEALIA LCYSYYNSTL YNYVDFTCDI THLEQLLYFL
451 DLLFWLSEIY GFEKVLNVAV HFVSRVGLSR WEFYVGLDEN FAERRRNLWW
501 KAFYFEKTLA SKLGYPSNID DSKINCLLPK NFRDVGFLDN RDFIENVHL
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