Protein Details

-Genomic Data for SRD1				Links
Protein SRD1	UniPROBE Accession Number UP00304	Species Saccharomyces cerevisiae	Domain GATA	Uniprot P09007
Synonyms Pre-rRNA-processing protein SRD1, Suppressor of rRNA-processing defect protein 1, YCR018C, YCR18C				IHOP 30951
				RefSeq NP_009944
Description Protein involved in the processing of pre-rRNA to mature rRNA; contains a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation				SGD YCR018C

-PBM Motif Data
Primary Motif (Seed-and-Wobble)				Primary PWM View Save
Primary Motif (Seed-and-Wobble)				Top Kmer AGATCTAC E.S. 0.499 GTAGATCT E.S. 0.499
Primary Motif (BEEML-PBM) (AMADID # 015681)				Primary PWM View
Primary Motif (BEEML-PBM) (AMADID # 015681)				Consensus NDAWCTVHNN NNDBAGWTHN
Primary Motif (BEEML-PBM) (AMADID # 016060)				Primary PWM View
Primary Motif (BEEML-PBM) (AMADID # 016060)				Consensus VRAWCTVNNN NNNBAGWTYB
Downloads Download the zip of all Srd1 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Srd1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID304&sourceDB=uniprobe

-Annotations
Target Gene Functional Category Enrichment 1) FunSpec analysis run with p<0.005 without Bonferroni correction (view) 2) FunSpec analysis run with p<0.05 with Bonferroni correction (view)
Conditional Specificity 1) Specific conditions (view) 2) Condition categories (view)

-SRD1 Datasets
Clone ID	Clone Type	Last Modified	Save	View
y1095	DNA binding domain only	2014-07-16
Insert sequence `1 QEANNLEGYH SCAQGTSRSA SITKKYSKKT TSRPKREKRQ TILPNGEIKE 51 CSKCKDTWTI QWRSGPDQNR ELCSPCGLAY GKRLKKENEK KRQAADKRID 101 RNNP`