Protein Details

-Genomic Data for SKN7				Links
Protein SKN7	UniPROBE Accession Number UP00313	Species Saccharomyces cerevisiae	Domain HSF_DNA-bind	Uniprot P38889
Synonyms BRY1, Peroxide sensitivity protein POS9, POS9, Transcription factor SKN7, YHR206W				IHOP 36598
				RefSeq NP_012076
Description Nuclear response regulator and transcription factor, part of a branched two-component signaling system; required for optimal induction of heat-shock genes in response to oxidative stress;				SGD YHR206W

-PBM Motif Data
Primary Motif (Seed-and-Wobble)				Primary PWM View Save
Primary Motif (Seed-and-Wobble)				Top Kmer T.TGGCCA.A E.S. 0.491 T.TGGCCA.A E.S. 0.491
Primary Motif (BEEML-PBM) (AMADID # 015681)				Primary PWM View
Primary Motif (BEEML-PBM) (AMADID # 015681)				Consensus NNNHVGCCVN NBGGCBDNNN
Downloads Download the zip of all Skn7 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Skn7 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID313&sourceDB=uniprobe

-Annotations
Target Gene Functional Category Enrichment 1) FunSpec analysis run with p<0.005 without Bonferroni correction (view) 2) FunSpec analysis run with p<0.05 with Bonferroni correction (view)
Conditional Specificity 1) Specific conditions (view) 2) Condition categories (view)

-SKN7 Datasets
Clone ID	Clone Type	Last Modified	Save	View
y111	Full length clone	2014-07-16
Insert sequence 1 MSFSTINSNV NKTTGDSNNN TTENSSTADL LGMDLLQSGP RLMNAMQPNN 51 SSDMLHINNK TNNVQQPAGN TNISSANAGA KAPANEFVRK LFRILENNEY 101 PDIVTWTENG KSFVVLDTGK FTTHILPNHF KHSNFASFVR QLNKYDFHKV 151 KRSPEERQRC KYGEQSWEFQ HPEFRVHYGK GLDNIKRKIP AQRKVLLDES 201 QKALLHFNSE GTNPNNPSGS LLNESTTELL LSNTVSKDAF GNLRRRVDKL 251 QKELDMSKME SYATKVELQK LNSKYNTVIE SLITFKTINE NLLNNFNTLC 301 STLANNGIEV PIFGDNGNRN PTGNTNPATT TAIQSNNNTN NASPATSTVS 351 LQLPNLPDQN SLTPNAQNNT VTLRKGFHVL LVEDDAVSIQ LCSKFLRKYG 401 CTVQVVSDGL SAISTLEKYR YDLVLMDIVM PNLDGATATS IVRSFDNETP 451 IIAMTGNIMN QDLITYLQHG MNDILAKPFT RDDLHSILIR YLKDRIPLCE 501 QQLPPRNSSP QTHSNTNTAN SNPNTINEQS LAMLPQDNPS TTTPVTPGAS 551 ISSAQHVQQG QQEQQHQIFH AQQQQQHHNA IANARSDVAI PNLEHEINTV 601 PHSSMGSTPQ LPQSTLQENQ LS