Protein Details

-Genomic Data for YBR239C				Links
Protein YBR239C	UniPROBE Accession Number UP00331	Species Saccharomyces cerevisiae	Domain Zn2Cys6	Uniprot P38140
Synonyms Putative 60.3 kDa transcriptional regulatory protein in PRP5-THI2 intergenic region, YBR1622				IHOP 32889
				RefSeq NP_009798
Description Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YBR239C is not an essential gene				SGD YBR239C

-PBM Motif Data
Primary Motif (Seed-and-Wobble)				Primary PWM View Save
Primary Motif (Seed-and-Wobble)				Top Kmer TTCCGGAA E.S. 0.497 TTCCGGAA E.S. 0.497
Primary Motif (BEEML-PBM) (AMADID # 015681)				Primary PWM View
Primary Motif (BEEML-PBM) (AMADID # 015681)				Consensus NNNCGGARNN NNYTCCGNNN
Downloads Download the zip of all Ybr239c PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Ybr239c in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID331&sourceDB=uniprobe

-Annotations
Target Gene Functional Category Enrichment 1) FunSpec analysis run with p<0.005 without Bonferroni correction (view) 2) FunSpec analysis run with p<0.05 with Bonferroni correction (view)
Conditional Specificity 1) Specific conditions (view) 2) Condition categories (view)

-YBR239C Datasets
Clone ID	Clone Type	Last Modified	Save	View
y151	Full length clone	2014-07-16
Insert sequence 1 MCTPDENDYK TSTDPDTSAN TNHTLEKKKR KKRKNTNVAC VNCSRLHVSC 51 EAKRPCLRCI SKGLTATCVD APRKKSKYLA GIPNRELPMN IQPDLPPRKI 101 MIPIYNNSSN SSLNVNNMGE QQKFTSPQHI VHKAKFLSNA ADSEYSILSN 151 IIYQDTLSNK IPIDILYSNT NSTSNSTIGN SSNNSPTGTN TSPEETEMEK 201 IRQLYSEQRA NIPPHPYPSS NQNVYSILLG PNSAKIVASQ VNLFANHFPL 251 VPVDSADNSL NFKRLLPRDP SEKSSQINWD SSINQYYLNS ETVTFPELAI 301 PLKRRKNHLV SVSLESCSPD AANIKSNVEW EHSLRYSTPM EIYTSINAPF 351 SHTPGFHHLL VYLKHRFNQQ DLVKMCRSIA EFRPIFIACS VTLTEEDMIF 401 MEQCYQRTLL EYVKFIAQIG TPTCIWRRNG QISYVNEEFE ILCGWTREEL 451 LNKMTFIVEI MDDESVRDYF KTLSKVAYRD FRGSEKMKVC RLLSPIKGKI 501 IHCCCMWTLK RDVSGLPLMI LGNFMPILN