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| -Genomic Data for UME6 |
Links |
- Protein
- UME6
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- UniPROBE Accession Number
- UP00334
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- Species
- Saccharomyces cerevisiae
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- Domain
- Zn2Cys6
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- Uniprot
- P39001
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- Synonyms
- CAR80, CARGR1, Negative transcriptional regulator of IME2, NIM2, RIM16, Transcriptional regulator UME6, YD8142.04C, YDR207C
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- IHOP
- 32212
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- RefSeq
- NP_010493
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- Description
- Key transcriptional regulator of early meiotic genes, binds URS1 upstream regulatory sequence, couples metabolic responses to nutritional cues with initiation and progression of meiosis, forms comp...
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- SGD
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YDR207C
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| -PBM Motif Data |
- Primary Motif (Seed-and-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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GGCGGCTA E.S. 0.495
TAGCCGCC E.S. 0.495
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- Primary Motif (BEEML-PBM) (AMADID # 015681)
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- Primary PWM
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View
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- Consensus
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NWNSCGCBNN
NNVGCGSNWN
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- Primary Motif (BEEML-PBM) (AMADID # 016060)
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- Primary PWM
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View
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- Consensus
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NWNSCGCBNN
NNVGCGSNWN
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- Downloads
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Download the
zip
of all Ume6 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Ume6
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID334&sourceDB=uniprobe
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| -Annotations |
- Target Gene Functional Category Enrichment
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1) FunSpec analysis run with p<0.005 without Bonferroni correction
(view)
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2) FunSpec analysis run with p<0.05 with Bonferroni correction
(view)
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- Conditional Specificity
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1) Specific conditions (view)
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2) Condition categories (view)
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| -UME6 Datasets |
| Clone ID |
Clone Type |
Last Modified |
Save |
View |
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y1100
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DNA binding domain only |
2014-07-16 |
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- Insert sequence
- 1 KGKNVKPKAK SKAKQSSKKR PNNTTSKSKA NNSQESNNAT SSTSQGTRSR
51 TGCWICRLRK KKCTEERPHC FNCERLKLDC HYDAFKPDFV SDPKKKQMKL
101 EEIKKKTKEA KRRAMKKK
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