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| -Genomic Data for SPT15 |
Links |
- Protein
- SPT15
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- UniPROBE Accession Number
- UP00337
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- Species
- Saccharomyces cerevisiae
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- Domain
- TBP
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- Uniprot
- P13393
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- Synonyms
- BTF1, TATA-binding factor, TATA-box-binding protein, TATA-box factor, TATA sequence-binding protein, TBP, TBP1, Transcription factor D, Transcription initiation factor TFIID TBP subunit, YER148W
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- IHOP
- 36855
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- RefSeq
- NP_011075
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- Description
- TATA-binding protein, general transcription factor that interacts with other factors to form the preinitiation complex at promoters, essential for viability
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- SGD
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YER148W
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| -PBM Motif Data |
- Primary Motif (Seed-and-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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G..ATATATA E.S. 0.491
TATATAT..C E.S. 0.491
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- Primary Motif (BEEML-PBM) (AMADID # 015681)
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- Primary PWM
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View
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- Consensus
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NNNNNNNNNN
NNNNNNNNNN
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- Downloads
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Download the
zip
of all Spt15 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Spt15
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID337&sourceDB=uniprobe
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| -Annotations |
- Target Gene Functional Category Enrichment
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1) FunSpec analysis run with p<0.005 without Bonferroni correction
(view)
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2) FunSpec analysis run with p<0.05 with Bonferroni correction
(view)
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- Conditional Specificity
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1) Specific conditions (view)
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2) Condition categories (view)
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| -SPT15 Datasets |
| Clone ID |
Clone Type |
Last Modified |
Save |
View |
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y1012
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Full length clone |
2014-07-16 |
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- Insert sequence
- 1 MADEERLKEF KEANKIVFDP NTRQVWENQN RDGTKPATTF QSEEDIKRAA
51 PESEKDTSAT SGIVPTLQNI VATVTLGCRL DLKTVALHAR NAEYNPKRFA
101 AVIMRIREPK TTALIFASGK MVVTGAKSED DSKLASRKYA RIIQKIGFAA
151 KFTDFKIQNI VGSCDVKFPI RLEGLAFSHG TFSSYEPELF PGLIYRMVKP
201 KIVLLIFVSG KIVLTGAKQR EEIYQAFEAI YPVLSEFRKM
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