Protein Details

-Genomic Data				Links
Protein Nkx3-1	UniPROBE Accession Number UP00389	Species Mus musculus	Domain Homeobox	Uniprot P97436
Name and Synonyms NK-3 transcription factor, locus 1 (Drosophila) bagpipe, Bax, Homeobox protein Nkx-3.1, NKX3.1, Nkx-3.1, Nkx3a, NKX3A				IHOP 123148
				RefSeq NP_035051
Description Mus musculus homeobox-containing protein Nkx-3.1 mRNA				JASPAR None Available

-PBM Motif Data for Nkx3-1
Primary Motif (Seed-And-Wobble)				Primary PWM View Save
Primary Motif (Seed-And-Wobble)				Top Kmer N/A N/A
Secondary Motif (Seed-And-Wobble)				Secondary PWM View Save
Secondary Motif (Seed-And-Wobble)				Top Kmer N/A N/A
Downloads Download the zip of all Nkx3-1 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Nkx3-1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=00389&sourceDB=uniprobe

-Nkx3-1 Datasets
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH2923	#1	AMADID #015681	E. coli	DNA binding domain only	2014-08-22
Clone pTH2923 insert sequence `1 NPGDLASAPQ VTKQPQKRSR AAFSHTQVIE LERKFSHQKY LSAPERAHLA 51 KNLKLTETQV KIWFQNRRYK TKRKQLSEDL GVLEKNSPLS LPA` DNA Binding Domains (Pfam) for clone 2923 Region 17..73 `1 KRSRAAFSHT QVIELERKFS HQKYLSAPER AHLAKNLKLT ETQVKIWFQN 51 RRYKTKR`
References `Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008`