Protein Details

-Genomic Data				Links
Protein Sox12	UniPROBE Accession Number UP00101	Species Mus musculus	Domain HMG_box	Uniprot Q04890
Name and Synonyms SRY-box containing gene 12 Sox-12, SOX-12 protein				IHOP 124773
				RefSeq NP_035568
Description None Available				JASPAR N/A

-PBM Motif Data for Sox12
Primary Motif (Seed-And-Wobble)				Primary PWM View Save
Primary Motif (Seed-And-Wobble)				Top Kmer ATTGTT.T.A E.S. 0.488 T.A.AACAAT E.S. 0.488
Secondary Motif (Seed-And-Wobble)				Secondary PWM View Save
Secondary Motif (Seed-And-Wobble)				Top Kmer AGACAAAG E.S. 0.452 CTTTGTCT E.S. 0.452
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3957)				PWM View
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3957)				Consensus HWTTGTBNNN NNNVACAAWD
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3957)				PWM View
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3957)				Consensus NNNNDBDNNN NNNHVHNNNN
Downloads Download the zip of all Sox12 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Sox12 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=101&sourceDB=uniprobe

-Sox12 Datasets
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3957	#1	AMADID #016060	IVT	DNA binding domain only	2014-08-13
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3957	#1	AMADID #015681	IVT	DNA binding domain only	2014-08-13
Clone pTH3957 insert sequence `1 AEGAREPGWC KTPSGHIKRP MNAFMVWSQH ERRKIMDQWP DMHNAEISKR 51 LGRRWQLLQD SEKIPFVREA ERLRLKHMAD YPDYKYRPRK KSKGAPAKAR 101 P` DNA Binding Domains (Pfam) for clone 3957 Region 17..85 `1 IKRPMNAFMV WSQHERRKIM DQWPDMHNAE ISKRLGRRWQ LLQDSEKIPF 51 VREAERLRLK HMADYPDYK`
References `Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009`