-Genomic Data Links
Protein
Ehf
UniPROBE Accession Number
UP00015
Species
Mus musculus
Domain
ETS
Name and Synonyms
ets homologous factor
9030625L19Rik, AU019492, ETS domain-containing transcription factor
Description
Mus musculus EHF (Ehf) mRNA, complete cds
-PBM Motif Data for Ehf
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
A.CCGGAAG E.S. 0.492
CTTCCGG.T E.S. 0.492
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
A.TTCCGA.C E.S. 0.466
G.TCGGAA.T E.S. 0.466
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH3056)
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PWM
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Consensus
BACVDGAWNV
BNWTCHBGTV
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3056)
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PWM
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Consensus
NBWTCCNNNN
NNNNGGAWVN
Downloads
Download the zip of all Ehf PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Ehf in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=15&sourceDB=uniprobe

-Ehf Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH3056 #1 AMADID #016060 E. coli DNA binding domain only 2014-08-13 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH3056 #1 AMADID #015681 E. coli DNA binding domain only 2014-08-13 save search
Clone pTH3056 insert sequence
1    QDHPVKSHTK KHNPRGTHLW EFIRDILLSP DKNPGLIKWE DRSEGIFRFL
51   KSEAVAQLWG KKKNNSSMTY EKLSRAMRYY YKREILERVD GRRLVYKFGK
101  NARGWRENEN

DNA Binding Domains (Pfam) for clone 3056
Region 16..101
1   GTHLWEFIRD ILLSPDKNPG LIKWEDRSEG IFRFLKSEAV AQLWGKKKNN
51  SSMTYEKLSR AMRYYYKREI LERVDGRRLV YKFGKN
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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