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| -Genomic Data |
Links |
- Protein
- Glis2
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- UniPROBE Accession Number
- UP00024
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- Species
- Mus musculus
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- Domain
- zf-C2H2
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- Uniprot
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Q8R4X9
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- Name and Synonyms
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GLIS family zinc finger 2
Gli5, Klf16, MGC36775, Nkl
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- IHOP
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141803
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- RefSeq
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NP_112461
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- Description
- GLIS family zinc finger 2 (Glis2), mRNA
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- JASPAR
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N/A
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| -PBM Motif Data for Glis2 |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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GACCCCCC E.S. 0.494
GGGGGGTC E.S. 0.494
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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TATTA..AAA E.S. 0.419
TTT..TAATA E.S. 0.419
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH1757)
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- PWM
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View
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- Consensus
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NNNNNVDNNN
NNNHBNNNNN
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1757)
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- PWM
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View
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- Consensus
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NNNNNNNNNN
NNNNNNNNNN
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- Downloads
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Download the
zip
of all Glis2 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Glis2
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=24&sourceDB=uniprobe
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| -Glis2 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1757 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2014-08-13 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1757 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2014-08-13 |
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- Clone pTH1757 insert sequence
- 1 PKDKCLSPEL PLAKQLVCRW AKCNQLFELL QDLVDHVNDH HVKPEQDARY
51 CCHWEGCARH GRGFNARYKM LIHIRTHTNE KPHRCPTCNK SFSRLENLKI
101 HNRSHTGEKP YVCPYEGCNK RYSNSSDRFK HTRTHYVDKP YYCKMPGCHK
151 RYTDPSSLRK HIKAHGHFVS HEQQELLQLR
- DNA Binding Domains (Pfam) for clone 1757
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Region 83..105
1 HRCPTCNKSF SRLENLKIHN RSH
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Region 111..135
1 YVCPYEGCNK RYSNSSDRFK HTRTH
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Region 141..165
1 YYCKMPGCHK RYTDPSSLRK HIKAH
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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