-Genomic Data Links
Protein
Zbtb3
UniPROBE Accession Number
UP00031
Species
Mus musculus
Domain
zf-C2H2
Name and Synonyms
zinc finger and BTB domain containing 3
Zinc finger and BTB domain-containing protein 3
Description
Mus musculus RIKEN cDNA 4930563M09 gene (4930563M09Rik), mRNA
-PBM Motif Data for Zbtb3
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
CACTGCA..C E.S. 0.498
G..TGCAGTG E.S. 0.498
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
CACTGGCA E.S. 0.444
TGCCAGTG E.S. 0.444
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH1048)
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PWM
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Consensus
NCACTGSMNN
NNKSCAGTGN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1048)
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PWM
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Consensus
HRCTGBHNNN
NNNDVCAGYD
Downloads
Download the zip of all Zbtb3 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Zbtb3 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=31&sourceDB=uniprobe

-Zbtb3 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH1048 #1 AMADID #016060 E. coli DNA binding domain only 2014-08-13 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH1048 #1 AMADID #015681 E. coli DNA binding domain only 2014-08-13 save search
Clone pTH1048 insert sequence
1   YEAAQGSFGN FTEDVPTCKT CGKTFSCSYT LRRHATVHTR ERPYECRYCL
51  RSYTQSGDLY RHIRKAHNED LAKRSKPDPE AS

DNA Binding Domains (Pfam) for clone 1048
Region 44..67
1   YECRYCLRSY TQSGDLYRHI RKAH
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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