-Genomic Data Links
Protein
Zfp105
UniPROBE Accession Number
UP00037
Species
Mus musculus
Domain
zf-C2H2
Name and Synonyms
zinc finger protein 105
None Available
Description
Mus musculus zinc finger protein 105 (Zfp105)
-PBM Motif Data for Zfp105
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
AAA.AACAA E.S. 0.487
TTGTT.TTT E.S. 0.487
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
G..TCAATAA E.S. 0.465
TTATTGA..C E.S. 0.465
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH2634)
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PWM
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Consensus
NNNNKBBNYS
SRNVVMNNNN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2634)
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PWM
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Consensus
TTDTTDDNNN
NNNHHAAHAA
Downloads
Download the zip of all Zfp105 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Zfp105 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=37&sourceDB=uniprobe

-Zfp105 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2634 #1 AMADID #016060 E. coli DNA binding domain only 2014-08-13 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2634 #1 AMADID #015681 E. coli DNA binding domain only 2014-08-13 save search
Clone pTH2634 insert sequence
1    STPGKNQKIQ PGQKPFTCSE CGKGFSQSAN LVVHQRIHTG EKPFECHECG
51   KAFIQSANLV VHQRIHTGQK PYVCGKCGKA FTQSSNLTVH QKIHSLEKTF
101  KCSECEKAFS YSSQLARHQK VHITEKCYEC NECGKTFTRS SNLIVHQRIH
151  TGEKPFACSD CDKAFTQSAN LIVHQRSHTG EKPYKCKDCE KAFSCFSHLI
201  VHQRIHTAEK PYDCSECGKA FSQLSCLIVH QRIHSGDLPY VCNECGKAFT
251  CSSYLLIHQR IHNGEKPYSC NECGKAFRQR SSLTVHQRTH TGEKPYECAK
301  CGAAFISNSH LMRHHRTHLV E

DNA Binding Domains (Pfam) for clone 2634
Region 16..38
1   FTCSECGKGF SQSANLVVHQ RIH

Region 44..66
1   FECHECGKAF IQSANLVVHQ RIH

Region 72..94
1   YVCGKCGKAF TQSSNLTVHQ KIH

Region 100..122
1   FKCSECEKAF SYSSQLARHQ KVH

Region 128..150
1   YECNECGKTF TRSSNLIVHQ RIH

Region 156..178
1   FACSDCDKAF TQSANLIVHQ RSH

Region 184..206
1   YKCKDCEKAF SCFSHLIVHQ RIH

Region 212..234
1   YDCSECGKAF SQLSCLIVHQ RIH

Region 240..262
1   YVCNECGKAF TCSSYLLIHQ RIH

Region 268..290
1   YSCNECGKAF RQRSSLTVHQ RTH

Region 296..318
1   YECAKCGAAF ISNSHLMRHH RTH
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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