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| -Genomic Data |
Links |
- Protein
- Foxj3
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- UniPROBE Accession Number
- UP00039
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- Species
- Mus musculus
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- Domain
- Fork_head
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- Uniprot
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Q8BUR3
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- Name and Synonyms
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forkhead box J3
C330039G02Rik, DKFZp761E2211, Forkhead box protein J3, Kiaa1041, mKIAA1041
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- IHOP
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153637
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- RefSeq
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NP_766287
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- Description
- Mus musculus similar to Putative forkhead box protein KIAA1041 (LOC230700), mRNA
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- JASPAR
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N/A
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| -PBM Motif Data for Foxj3 |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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GTAAACA.A E.S. 0.498
T.TGTTTAC E.S. 0.498
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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CAAAACA.A E.S. 0.490
T.TGTTTTG E.S. 0.490
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH0982)
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- PWM
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View
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- Consensus
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NRTAAACANN
NNTGTTTAYN
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH0982)
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- PWM
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View
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- Consensus
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NRTAAAYANN
NNTRTTTAYN
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- Downloads
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Download the
zip
of all Foxj3 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Foxj3
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=39&sourceDB=uniprobe
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| -Foxj3 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH982 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2014-08-13 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH982 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2014-08-13 |
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- Clone pTH982 insert sequence
- 1 DPNTTLDQEE VQQHKDGKPP YSYASLITFA INSSPKKKMT LSEIYQWICD
51 NFPYYREAGS GWKNSIRHNL SLNKCFLKVP RSKDDPGKGS YWAIDTNPKE
101 DTLPTRPKKR ARSVERASTP YSIDSDSLGM EC
- DNA Binding Domains (Pfam) for clone 982
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Region 18..117
1 KPPYSYASLI TFAINSSPKK KMTLSEIYQW ICDNFPYYRE AGSGWKNSIR
51 HNLSLNKCFL KVPRSKDDPG KGSYWAIDTN PKEDTLPTRP KKRARSVERA
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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