-Genomic Data Links
Protein
Bhlhb2
UniPROBE Accession Number
UP00050
Species
Mus musculus
Domain
HLH
Name and Synonyms
basic helix-loop-helix domain containing, class B2
bHLHB2, C130042M06Rik, Class B basic helix-loop-helix protein 2, Clast5, CR8, cytokine response gene 8, Dec1, DEC1, E47 interaction protein 1, eip1 (E47 interaction protein 1), eipl, Sharp2, Stimulated with retinoic acid 13, Stra13, Stra14
Description
Mus musculus basic helix-loop-helix domain containing, class B2
-PBM Motif Data for Bhlhb2
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
TCACGTGA E.S. 0.499
TCACGTGA E.S. 0.499
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
T.CACGTG.A E.S. 0.496
T.CACGTG.A E.S. 0.496
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH1274)
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PWM
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Consensus
NKCACGHGNN
NNCDCGTGMN
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH4971)
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PWM
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Consensus
NNCACGTGMN
NKCACGTGNN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH4971)
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PWM
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Consensus
NCACGTGMBN
NVKCACGTGN
Downloads
Download the zip of all Bhlhb2 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Bhlhb2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=50&sourceDB=uniprobe

-Bhlhb2 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH1274 #1 AMADID #016060 E. coli DNA binding domain only 2014-08-13 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH1274 #1 AMADID #015681 E. coli DNA binding domain only 2014-08-13 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH4971 #1 AMADID #016060 E. coli Full length clone 2014-08-13 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH4971 #1 AMADID #015681 E. coli Full length clone 2014-08-13 save search
Clone pTH1274 insert sequence
1   KSRRGIKRSE DSKETYKLPH RLIEKKRRDR INECIAQLKD LLPEHLKLTT
51  LGHLEKAVVL ELTLKHVKAL TNLIDQQQQK IIALQSGLQA G

DNA Binding Domains (Pfam) for clone 1274
Region 16..71
1   YKLPHRLIEK KRRDRINECI AQLKDLLPEH LKLTTLGHLE KAVVLELTLK
51  HVKALT
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


Clone pTH4971 insert sequence
1    MERIPSAQPP PACLPKAPGL EHGDLPGMYP AHMYQVYKSR RGIKRSEDSK
51   ETYKLPHRLI EKKRRDRINE CIAQLKDLLP EHLKLTTLGH LEKAVVLELT
101  LKHVKALTNL IDQQQQKIIA LQSGLQAGEL SGRNVETGQE MFCSGFQTCA
151  REVLQYLAKH ENTRDLKSSQ LVTHLHRVVS ELLQGGTSRK PSDPAPKVMD
201  FKEKPSSPAK GSEGPGKNCV PVIQRTFAHS SGEQSGSDTD TDSGYGGESE
251  KGDLRSEQPC FKSDHGRRFT MGERIGAIKQ ESEEPPTKKN RMQLSDDEGH
301  FTSSDLISSP FLGPHPHQPP FCLPFYLIPP SATAYLPMLE KCWYPTSVPV
351  LYPGLNASAA ALSSFMNPDK ISAPLLMPQR LPSPLPAHPS VDSSVLLQAL
401  KPIPPLNLET KD

DNA Binding Domains (Pfam) for clone 4971
Not Available
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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