Protein Details

-Genomic Data				Links
Protein Sox8	UniPROBE Accession Number UP00051	Species Mus musculus	Domain HMG_box	Uniprot Q04886
Name and Synonyms SRY-box containing gene 8 Sox-8, Transcription factor SOX-8				IHOP 124786
				RefSeq NP_035577
Description SRY-box containing gene 8, mRNA (cDNA clone MGC:78314 IMAGE:6306276), complete cds				JASPAR MA0077

-PBM Motif Data for Sox8
Primary Motif (Seed-And-Wobble)				Primary PWM View Save
Primary Motif (Seed-And-Wobble)				Top Kmer AATTGTTC E.S. 0.480 GAACAATT E.S. 0.480
Secondary Motif (Seed-And-Wobble)				Secondary PWM View Save
Secondary Motif (Seed-And-Wobble)				Top Kmer ATTCATG..A E.S. 0.460 T..CATGAAT E.S. 0.460
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH1733)				PWM View
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH1733)				Consensus ATTVWNNNNN NNNNNWBAAT
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1733)				PWM View
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1733)				Consensus NNNNNWBAAW WTTVWNNNNN
Downloads Download the zip of all Sox8 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Sox8 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=51&sourceDB=uniprobe

-Sox8 Datasets
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH1733	#1	AMADID #016060	E. coli	DNA binding domain only	2014-08-13
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH1733	#1	AMADID #015681	E. coli	DNA binding domain only	2014-08-13
Clone pTH1733 insert sequence `1 MPVRGGGGGT LKAKPHVKRP MNAFMVWAQA ARRKLADQYP HLHNAELSKT 51 LGKLWRLLSE SEKRPFVEEA ERLRVQHKKD HPDYKYQPRR RKSVKTGRSD 101 S` DNA Binding Domains (Pfam) for clone 1733 Region 17..85 `1 VKRPMNAFMV WAQAARRKLA DQYPHLHNAE LSKTLGKLWR LLSESEKRPF 51 VEEAERLRVQ HKKDHPDYK`
References `Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009`