-Genomic Data Links
Protein
Tcf7
UniPROBE Accession Number
UP00054
Species
Mus musculus
Domain
HMG_box
Name and Synonyms
Transcription factor 7, T-cell specific
AI465550, T cell factor-1, T-cell factor 1, T-cell-specific transcription factor 1, Tcf1, Tcf-1, TCF-1, Transcription factor 7
Description
None Available
-PBM Motif Data for Tcf7
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
A.ATCAAAG E.S. 0.496
CTTTGAT.T E.S. 0.496
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
TATTA.AAA E.S. 0.407
TTT.TAATA E.S. 0.407
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH0950)
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PWM
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Consensus
NNNNNNDNDN
NHNHNNNNNN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH0950)
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PWM
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Consensus
NNNNNNDNNN
NNNHNNNNNN
Downloads
Download the zip of all Tcf7 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Tcf7 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=54&sourceDB=uniprobe

-Tcf7 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH950 #1 AMADID #016060 IVT DNA binding domain only 2014-08-13 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH950 #1 AMADID #015681 IVT DNA binding domain only 2014-08-13 save search
Clone pTH950 insert sequence
1    KTQAEPKAEK EAKKPVIKKP LNAFMLYMKE MRAKVIAECT LKESAAINQI
51   LGRRWHALSR EEQAKYYELA RKERQLHMQL YPGWSARDNY GKKKRRSREK
101  H

DNA Binding Domains (Pfam) for clone 950
Region 17..85
1   IKKPLNAFML YMKEMRAKVI AECTLKESAA INQILGRRWH ALSREEQAKY
51  YELARKERQL HMQLYPGWS
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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