|
|
| -Genomic Data |
Links |
- Protein
- Tcf7
|
- UniPROBE Accession Number
- UP00054
|
- Species
- Mus musculus
|
- Domain
- HMG_box
|
- Uniprot
-
Q00417
|
- Name and Synonyms
-
Transcription factor 7, T-cell specific
AI465550, T cell factor-1, T-cell factor 1, T-cell-specific transcription factor 1, Tcf1, Tcf-1, TCF-1, Transcription factor 7
|
- IHOP
-
125385
|
- RefSeq
-
NP_033357
|
- Description
- None Available
|
- JASPAR
-
N/A
|
| -PBM Motif Data for Tcf7 |
- Primary Motif (Seed-And-Wobble)
-
|
- Primary PWM
-
View
Save
|
- Top Kmer
-
A.ATCAAAG E.S. 0.496
CTTTGAT.T E.S. 0.496
|
- Secondary Motif (Seed-And-Wobble)
-
|
- Secondary PWM
-
View
Save
|
- Top Kmer
-
TATTA.AAA E.S. 0.407
TTT.TAATA E.S. 0.407
|
-
Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH0950)
-
|
- PWM
-
View
|
- Consensus
-
NNNNNNDNDN
NHNHNNNNNN
|
-
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH0950)
-
|
- PWM
-
View
|
- Consensus
-
NNNNNNDNNN
NNNHNNNNNN
|
- Downloads
-
Download the
zip
of all Tcf7 PBM files
or view the
downloads directory
for individual files.
|
- Link to TFBSshape
-
This link will take you to the corresponding entry for Tcf7
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=54&sourceDB=uniprobe
|
| -Tcf7 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
|
pTH950 |
#1 |
AMADID #016060 |
IVT |
DNA binding domain only |
2014-08-13 |
|
|
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
|
pTH950 |
#1 |
AMADID #015681 |
IVT |
DNA binding domain only |
2014-08-13 |
|
|
- Clone pTH950 insert sequence
- 1 KTQAEPKAEK EAKKPVIKKP LNAFMLYMKE MRAKVIAECT LKESAAINQI
51 LGRRWHALSR EEQAKYYELA RKERQLHMQL YPGWSARDNY GKKKRRSREK
101 H
- DNA Binding Domains (Pfam) for clone 950
-
Region 17..85
1 IKKPLNAFML YMKEMRAKVI AECTLKESAA INQILGRRWH ALSREEQAKY
51 YELARKERQL HMQLYPGWS
-
|
- References
-
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
|
|