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| -Genomic Data |
Links |
- Protein
- Foxl1
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- UniPROBE Accession Number
- UP00061
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- Species
- Mus musculus
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- Domain
- Fork_head
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- Uniprot
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Q64731
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- Name and Synonyms
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forkhead box L1
fkh6, Fkh6, fkh-6, Fkhl11, Forkhead box protein L1, Forkhead-related protein FKHL11, FREAC7, Transcription factor FKH-6
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- IHOP
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121049
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- RefSeq
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NP_032050
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- Description
- M.musculus fkh-6 gene
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- JASPAR
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MA0033
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| -PBM Motif Data for Foxl1 |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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A..GTAAACA E.S. 0.498
TGTTTAC..T E.S. 0.498
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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CAAAACAA E.S. 0.476
TTGTTTTG E.S. 0.476
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH2809)
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- PWM
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View
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- Consensus
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NNRTMAAYAN
NTRTTKAYNN
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2809)
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- PWM
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View
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- Consensus
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NTRTTKAYNN
NNRTMAAYAN
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- Downloads
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Download the
zip
of all Foxl1 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Foxl1
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=61&sourceDB=uniprobe
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| -Foxl1 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH2809 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2014-08-13 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH2809 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2014-08-13 |
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- Clone pTH2809 insert sequence
- 1 FAPAAALAGP GRVEPPQKPP YSYIALIAMA IQDAPEQRVT LNGIYQFIMD
51 RFPFYHDNRQ GWQNSIRHNL SLNECFVKVP REKGRPGKGS YWTLDPRCLD
101 MFENGNYRRR KRKPKPAAGS PEAKRTRV
- DNA Binding Domains (Pfam) for clone 2809
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Region 18..113
1 KPPYSYIALI AMAIQDAPEQ RVTLNGIYQF IMDRFPFYHD NRQGWQNSIR
51 HNLSLNECFV KVPREKGRPG KGSYWTLDPR CLDMFENGNY RRRKRK
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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