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| -Genomic Data |
Links |
- Protein
- Lef1
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- UniPROBE Accession Number
- UP00067
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- Species
- Mus musculus
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- Domain
- HMG_box
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- Uniprot
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P27782
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- Name and Synonyms
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lymphoid enhancer binding factor 1
3000002B05, AI451430, Lef-1, LEF-1, Lymphoid enhancer-binding factor 1, lymphoid enhancer factor 1
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- IHOP
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122501
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- RefSeq
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NP_034833
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- Description
- None Available
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- JASPAR
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N/A
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| -PBM Motif Data for Lef1 |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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CTTTGATC E.S. 0.498
GATCAAAG E.S. 0.498
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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ATCAATCA E.S. 0.476
TGATTGAT E.S. 0.476
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH3504)
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- PWM
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View
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- Consensus
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BBTTTGAWSN
NSWTCAAAVV
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3504)
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- PWM
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View
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- Consensus
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NNHDWNWNNN
NNNWNWHDNN
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- Downloads
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Download the
zip
of all Lef1 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Lef1
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=67&sourceDB=uniprobe
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| -Lef1 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH3504 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2014-08-13 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH3504 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2014-08-13 |
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- Clone pTH3504 insert sequence
- 1 KPQHEQRKEQ EPKRPHIKKP LNAFMLYMKE MRANVVAECT LKESAAINQI
51 LGRRWHALSR EEQAKYYELA RKERQLHMQL YPGWSARDNY GKKKKRKREK
101 L
- DNA Binding Domains (Pfam) for clone 3504
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Region 17..85
1 IKKPLNAFML YMKEMRANVV AECTLKESAA INQILGRRWH ALSREEQAKY
51 YELARKERQL HMQLYPGWS
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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