Protein Details

-Genomic Data				Links
Protein IRC900814	UniPROBE Accession Number UP00072	Species Mus musculus	Domain SAND	Uniprot None Available
Name and Synonyms None Available None Available				IHOP None Available
Name and Synonyms None Available None Available				RefSeq None Available
Description Arhgef12				JASPAR N/A

-PBM Motif Data for IRC900814
Primary Motif (Seed-And-Wobble)				Primary PWM View Save
Primary Motif (Seed-And-Wobble)				Top Kmer ACGACAAA E.S. 0.494 TTTGTCGT E.S. 0.494
Secondary Motif (Seed-And-Wobble)				Secondary PWM View Save
Secondary Motif (Seed-And-Wobble)				Top Kmer AAAGTCGT E.S. 0.489 ACGACTTT E.S. 0.489
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3520)				PWM View
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3520)				Consensus NNNCGNNNNN NNNNNCGNNN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3520)				PWM View
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3520)				Consensus NNNNNHRNNN NNNYDNNNNN
Downloads Download the zip of all IRC900814 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for IRC900814 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=72&sourceDB=uniprobe

-IRC900814 Datasets
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3520	#1	AMADID #016060	E. coli	DNA binding domain only	2014-08-13
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3520	#1	AMADID #015681	E. coli	DNA binding domain only	2014-08-13
Clone pTH3520 insert sequence `1 NPGRTAKIRG LRRRRKENAD FSAELLPVTC GNLKGVLHKD KFKQGISVKS 51 IQCQNGNWFT PSEFEMMGGY GKSKNWKLSL RCHNWPLKLL IQRKFLPNPP 101 RIHRKRKEQR TQ` DNA Binding Domains (Pfam) for clone 3520 Region 16..97 `1 KENADFSAEL LPVTCGNLKG VLHKDKFKQG ISVKSIQCQN GNWFTPSEFE 51 MMGGYGKSKN WKLSLRCHNW PLKLLIQRKF LP`
References `Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009`