Protein Details

-Genomic Data				Links
Protein Sox15	UniPROBE Accession Number UP00075	Species Mus musculus	Domain HMG_box	Uniprot P43267
Name and Synonyms SRY-box containing gene 15 Sox-15, SOX-15 protein				IHOP 124776
				RefSeq NP_033261
Description None Available				JASPAR N/A

-PBM Motif Data for Sox15
Primary Motif (Seed-And-Wobble)				Primary PWM View Save
Primary Motif (Seed-And-Wobble)				Top Kmer GAACAATA E.S. 0.464 TATTGTTC E.S. 0.464
Secondary Motif (Seed-And-Wobble)				Secondary PWM View Save
Secondary Motif (Seed-And-Wobble)				Top Kmer AATG.AATT E.S. 0.433 AATT.CATT E.S. 0.433
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3457)				PWM View
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3457)				Consensus WTTVWNNNNN NNNNNWBAAW
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3457)				PWM View
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3457)				Consensus SARHSNNNNN NNNNNSDYTS
Downloads Download the zip of all Sox15 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Sox15 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=75&sourceDB=uniprobe

-Sox15 Datasets
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3457	#1	AMADID #016060	E. coli	DNA binding domain only	2014-08-13
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3457	#1	AMADID #015681	E. coli	DNA binding domain only	2014-08-13
Clone pTH3457 insert sequence `1 EAGGSPGASG GLPLEKVKRP MNAFMVWSSV QRRQMAQQNP KMHNSEISKR 51 LGAQWKLLGD EEKRPFVEEA KRLRARHLRD YPDYKYRPRR KSKNSSTGSV 101 P` DNA Binding Domains (Pfam) for clone 3457 Region 17..85 `1 VKRPMNAFMV WSSVQRRQMA QQNPKMHNSE ISKRLGAQWK LLGDEEKRPF 51 VEEAKRLRAR HLRDYPDYK`
References `Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009`