Protein Details

-Genomic Data				Links
Protein Irf3	UniPROBE Accession Number UP00086	Species Mus musculus	Domain IRF	Uniprot P70671
Name and Synonyms interferon regulatory factor 3 C920001K05Rik, Interferon regulatory factor 3, IRF-3, MGC91046				IHOP 129010
				RefSeq NP_058545
Description None Available				JASPAR N/A

-PBM Motif Data for Irf3
Primary Motif (Seed-And-Wobble)				Primary PWM View Save
Primary Motif (Seed-And-Wobble)				Top Kmer GAA..GAAAC E.S. 0.491 GTTTC..TTC E.S. 0.491
Secondary Motif (Seed-And-Wobble)				Secondary PWM View Save
Secondary Motif (Seed-And-Wobble)				Top Kmer AGAAAGG..C E.S. 0.463 G..CCTTTCT E.S. 0.463
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3985)				PWM View
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3985)				Consensus STTTCVNWHY RDWNBGAAAS
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3985)				PWM View
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3985)				Consensus STTKCVNWHY RDWNBGMAAS
Downloads Download the zip of all Irf3 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Irf3 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=86&sourceDB=uniprobe

-Irf3 Datasets
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3985	#1	AMADID #016060	IVT	DNA binding domain only	2014-08-13
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3985	#1	AMADID #015681	IVT	DNA binding domain only	2014-08-13
Clone pTH3985 insert sequence `1 METPKPRILP WLVSQLDLGQ LEGVAWLDES RTRFRIPWKH GLRQDAQMAD 51 FGIFQAWAEA SGAYTPGKDK PDVSTWKRNF RSALNRKEVL RLAADNSKDP 101 YDPHKVYEFV TPGARDFVHL GASPDTN` DNA Binding Domains (Pfam) for clone 3985 Region 7..112 `1 RILPWLVSQL DLGQLEGVAW LDESRTRFRI PWKHGLRQDA QMADFGIFQA 51 WAEASGAYTP GKDKPDVSTW KRNFRSALNR KEVLRLAADN SKDPYDPHKV 101 YEFVTP`
References `Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009`