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| -Genomic Data |
Links |
- Protein
- Nr2f2
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- UniPROBE Accession Number
- UP00009
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- Species
- Mus musculus
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- Domain
- ZnF_C4
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- Uniprot
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P43135
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- Name and Synonyms
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nuclear receptor subfamily 2, group F, member 2
2700033K02Rik, 9430015G03Rik, Apolipoprotein AI regulatory protein 1, Aporp1, Arp1, Arp-1, ARP-1, COUP-TF2, COUPTFB, COUP-TFII, COUP-TF II, COUP transcription factor 2, SVP40, Tcfcoup2, Tfcoup2
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- IHOP
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119511
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- RefSeq
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NP_899084
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- Description
- Mus musculus nuclear receptor subfamily 2, group F, member 2 (Nr2f2), transcript variant 1, mRNA.
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- JASPAR
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N/A
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| -PBM Motif Data for Nr2f2 |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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AAAGGTCA E.S. 0.496
TGACCTTT E.S. 0.496
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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CCGGGTCA E.S. 0.493
TGACCCGG E.S. 0.493
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH2192)
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- PWM
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View
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- Consensus
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NRRGGTCANN
NNTGACCYYN
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2192)
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- PWM
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View
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- Consensus
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NNTGACCYYN
NRRGGTCANN
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- Downloads
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Download the
zip
of all Nr2f2 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Nr2f2
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=9&sourceDB=uniprobe
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| -Nr2f2 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH2192 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2014-08-13 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH2192 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2014-08-13 |
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- Clone pTH2192 insert sequence
- 1 QTAAGGQGGP GGPGSDKQQQ QQHIECVVCG DKSSGKHYGQ FTCEGCKSFF
51 KRSVRRNLSY TCRANRNCPI DQHHRNQCQY CRLKKCLKVG MRREAVQRGR
101 MPPTQPTH
- DNA Binding Domains (Pfam) for clone 2192
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Region 24..99
1 IECVVCGDKS SGKHYGQFTC EGCKSFFKRS VRRNLSYTCR ANRNCPIDQH
51 HRNQCQYCRL KKCLKVGMRR EAVQRG
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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