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| -Genomic Data |
Links |
- Protein
- Elf3
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- UniPROBE Accession Number
- UP00090
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- Species
- Mus musculus
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- Domain
- AT_hook, ETS
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- Uniprot
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Q3UPW2
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- Name and Synonyms
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E74-like factor 3
Epithelial-restricted with serine box, Epithelium-restricted Ets protein ESX, Epithelium-specific Ets transcription factor 1, Ert, ESE-1, Esx, ESX, ETS-related transcription factor Elf-3, jen, Jen
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- IHOP
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120778
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- RefSeq
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NP_031947
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- Description
- ETS-related transcription factor Elf-3 isoform 1
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- JASPAR
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MA0136
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| -PBM Motif Data for Elf3 |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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A..AGGAAAT E.S. 0.492
ATTTCCT..T E.S. 0.492
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- Secondary Motif (Seed-And-Wobble)
-
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- Secondary PWM
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View
Save
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- Top Kmer
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T..AAAAAAA E.S. 0.455
TTTTTTT..A E.S. 0.455
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH3876)
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- PWM
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View
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- Consensus
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NNNNRDAWVN
NBWTHYNNNN
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3876)
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- PWM
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View
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- Consensus
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NNVVGGAARN
NYTTCCBBNN
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- Downloads
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Download the
zip
of all Elf3 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Elf3
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=90&sourceDB=uniprobe
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| -Elf3 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH3876 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2014-08-13 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH3876 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2014-08-13 |
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- Clone pTH3876 insert sequence
- 1 RDGFPDYKKG EPKHGKRKRG RPRKLSKEYW DCLEGKKSKH APRGTHLWEF
51 IRDILIHPEL NEGLMKWENR HEGVFKFLRS EAVAQLWGQK KKNSNMTYEK
101 LSRAMRYYYK REILERVDGR RLVYKFGKNS SGWKEEEVGE SRN
- DNA Binding Domains (Pfam) for clone 3876
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Region 44..129
1 GTHLWEFIRD ILIHPELNEG LMKWENRHEG VFKFLRSEAV AQLWGQKKKN
51 SNMTYEKLSR AMRYYYKREI LERVDGRRLV YKFGKN
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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