Protein Details

-Genomic Data for CLAMP				Links
Protein CLAMP	UniPROBE Accession Number UP00534	Species Drosophila melanogaster	Domain zf-H2C2_2	Swiss-Prot Q9V9N4
Name and Synonyms Name: Chromatin-linked adaptor for MSL proteins. Synonyms:CG1832, DMEL\CG1832				IHOP None Available
				NCBI RefSeq NP_610137.1
Description None Available				JASPAR None Available

-PBM Motif Data for clone CLAMP_Cterm6Zn
Primary Motif				Primary PWM Save
Primary Motif				Top Kmer AGA.AGAGA E.S. 0.497 TCTCT.TCT E.S. 0.497
Secondary Motif				Secondary PWM Save
Secondary Motif				Top Kmer GTGA.A.GGA E.S. 0.440 TCC.T.TCAC E.S. 0.440
PBM-Derived DNA Binding Site Motif (BEEML-PBM)				PWM Save
PBM-Derived DNA Binding Site Motif (BEEML-PBM)				Consensus RTGAGCGAGA TCTCGCTCAY
Downloads Download the zip of all CLAMP_Cterm6Zn PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.

-PBM Motif Data for clone CLAMP_Cterm4Zn
Primary Motif				Primary PWM Save
Primary Motif				Top Kmer AGAG.GAGA E.S. 0.498 TCTC.CTCT E.S. 0.498
Secondary Motif				Secondary PWM Save
Secondary Motif				Top Kmer CTCTTCTA E.S. 0.495 TAGAAGAG E.S. 0.495
PBM-Derived DNA Binding Site Motif (BEEML-PBM)				PWM Save
PBM-Derived DNA Binding Site Motif (BEEML-PBM)				Consensus DWGARNGRGA TCYCNYTCWH
Downloads Download the zip of all CLAMP_Cterm4Zn PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.

-CLAMP Datasets
Clone	Clone Type	Last Modified	Save	View
CLAMP_Cterm6Zn	DNA binding domain only	2014-09-08
CLAMP_Cterm6Zn Insert Sequence `1 TVKTENPSKP FSCNICGGLF SRYSSLWSHK KLHSGEKNYK CSICGLAFAK 51 AVYLKNHARI HTGEKPYKCQ TCGMQFSQSP HLKNHERTHS GERPYVCGVC 101 DKGFARHATL WNHRRIHTGE KPYKCEICGS AFSQAAHLKN HAKVHSGEKP 151 YKCEICSAAF ADRFALKRHR GIHQKYGQTA PRQTSSDGMI VHKQEIPDME 201 DEAQQEVIIG GL`
CLAMP_Cterm4Zn	DNA binding domain only	2014-09-08
CLAMP_Cterm4Zn Insert Sequence `1 GEKPYKCQTC GMQFSQSPHL KNHERTHSGE RPYVCGVCDK GFARHATLWN 51 HRRIHTGEKP YKCEICGSAF SQAAHLKNHA KVHSGEKPYK CEICSAAFAD 101 RFALKRHRGI HQKYGQTAPR QTSSDGMIVH KQEIPDMEDE AQQEVIIGGL`
References `Data are analyzed by array design with AMADID # 015681 in Soruco et al., Genes Dev 2013`