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View All Genomic Data PBM Motif Data PBM Clones Minimize All

-Genomic Data for Gli1				Links
Protein Gli1	UniPROBE Accession Number UP00538	Species Mus musculus	Domain zf-H2C2_2	Swiss-Prot P47806
Name and Synonyms Name: GLI-Kruppel family member GLI1. Synonyms:Zinc finger protein GLI1; AV235269; Zfp-5; Zfp5; Glioma-associated oncogene homolog				IHOP 121299
				NCBI RefSeq NP_034426
Description Acts as a transcriptional activator. May regulate the transcription of specific genes during normal development. May play a role in craniofacial development and digital development, as well as development of the central nervous system and gastrointestinal tract. Mediates SHH signaling and thus cell proliferation and differentiation.				JASPAR None Available

-PBM Motif Data for Gli1
Primary Motif Reverse Complement (RC)				Primary PWM Save
				Top Kmer GACCACCC E.S. 0.498 GGGTGGTC E.S. 0.498
Secondary Motif Reverse Complement (RC)				Secondary PWM Save
				Top Kmer ACC.CCCAC E.S. 0.491 GTGGG.GGT E.S. 0.491
Primary Motif Reverse Complement (RC)				Primary PWM Save
				Top Kmer GACCACCC E.S. 0.498 GGGTGGTC E.S. 0.498
Secondary Motif Reverse Complement (RC)				Secondary PWM Save
				Top Kmer ACC.CCCAC E.S. 0.492 GTGGG.GGT E.S. 0.492
PBM-Derived DNA Binding Site Motif (BEEML-PBM) (AMADID # 015681) Reverse Complement (RC)				PWM Save
				Consensus NKVCCHCMNN NNKGDGGBMN
PBM-Derived DNA Binding Site Motif (BEEML-PBM) (AMADID # 016060) Reverse Complement (RC)				PWM Save
				Consensus KVCCNCMNNN NNNKGNGGBM
Downloads Download the zip of all Gli1 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.

-Gli1 Datasets
Gene	Clone Type	Last Modified	Save	View
Gli1	DNA binding domain only	2014-09-06
Gli1 Insert Sequence 1    DLEREEKPEP ESVYETDCRW DGCSQEFDSQ EQLVHHINSE HIHGERKEFV 51   CHWGGCSREL RPFKAQYMLV VHMRRHTGEK PHKCTFEGCR KSYSRLENLK 101  THLRSHTGEK PYMCEQEGCS KAFSNASDRA KHQNRTHSNE KPYVCKLPGC 151  TKRYTDPSSL RKHVKTVHGP DAHVTKRHRG DGPLPRAQ
References Data are analyzed by array designs with AMADID #s 016060, 015681 in Peterson et al., Genes Dev 2012