-Genomic Data for NST2 Links
Protein
NST2
UniPROBE Accession Number
UP00575
Species
Arabidopsis thaliana
Domain
NAC
Name and Synonyms
Name: NAC transcription factor NST2.
Synonyms:ARABIDOPSIS NAC DOMAIN PROTEIN 66, At3g61910, F21F14.80, NAC066, NAC domain-containing protein 66, NAC domain protein 66, NAC SECONDARY WALL THICKENING PROMOTING FACTOR2, NAC SECONDARY WALL THICKENING PROMOTING FACTOR2, NST2, Protein NAC SECONDARY WALL THICKENING PROMOTING FACTOR 2
Description
Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues such as tracheary elements
-PBM Motif Data for NST2
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
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Top Kmer
TTACGCAA E.S. 0.483
TTGCGTAA E.S. 0.483
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
ACACGCAA E.S. 0.465
TTGCGTGT E.S. 0.465
Downloads
Download the zip of all NST2 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-NST2 Datasets
Clone Clone Type Last Modified Save View
NST2 DNA binding domain only 2016-02-06 search save
NST2 Insert Sequence
1    MNISVNGQSQ VPPGFRFHPT EEELLKYYLR KKISNIKIDL DVIPDIDLNK
51   LEPWDIQEMC KIGTTPQNDW YFYSHKDKKY PTGTRTNRAT TVGFWKATGR
101  DKTIYTNGDR IGMRKTLVFY KGRAPHGQKS DWIMHEYRLD ESVLISSCGD
151  HDVNVETCDV IGSDEGWVVC RVFKKNNLCK NMIS



References
Data are analyzed by array designs with AMADID #s 034149, 034150 in Lindemose et al, Nucleic Acids Res. 2014


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