-Genomic Data for NTL8 Links
Protein
NTL8
UniPROBE Accession Number
UP00577
Species
Arabidopsis thaliana
Domain
NAC
Swiss-Prot
Q9XIN7
Name and Synonyms
Name: protein NTM1-like 8.
Synonyms:ANAC040, Arabidopsis NAC domain containing protein 40, ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 40, F12K2_12, F12K2.12, NTM1-like 8, NTM1-LIKE 8
IHOP
2654
NCBI Acc.
NM_128289
Description
Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP), probably via metalloprotease activity. Regulates gibberellic acid-mediated salt-responsive repression of seed germination and flowering via FT, thus delaying seed germination under high salinity conditions.
JASPAR
None Available
-PBM Motif Data for NTL8
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
Image Not Available. We apologize for the inconvenience.
PWM
Save
Top Kmer
ATTAAG.AA E.S. 0.495
TT.CTTAAT E.S. 0.495
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
Image Not Available. We apologize for the inconvenience.
PWM
Save
Top Kmer
AAGGAAAC E.S. 0.484
GTTTCCTT E.S. 0.484
Downloads
Download the zip of all NTL8 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-NTL8 Datasets
Clone Clone Type Last Modified Save View
NTL8 DNA binding domain only 2016-02-06 search save
NTL8 Insert Sequence
1    MSKEAEMSIA VSALFPGFRF SPTDVELISY YLRRKIDGDE NSVAVIAEVE
51   IYKFEPWDLP EESKLKSENE WFYFCARGRK YPHGSQSRRA TQLGYWKATG
101  KERSVKSGNQ VVGTKRTLVF HIGRAPRGER TEWIMHEYCI HGAPQDALVV
151  CRLRKNA


References
Data are analyzed by array designs with AMADID #s 034149, 034150 in Lindemose et al, Nucleic Acids Res. 2014


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