Protein Details

-Genomic Data for SND1				Links
Protein SND1	UniPROBE Accession Number UP00578	Species Arabidopsis thaliana	Domain NAC	Swiss-Prot Q9LPI7
Name and Synonyms Name: NAC Domain transcription factor SND1. Synonyms:ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 12, At1g32770, F6N18_15, F6N18.15, NAC012, NAC domain containing protein 12, NAC domain-containing protein 12, NAC SECONDARY WALL THICKENING PROMOTING 3, NST3, Protein NAC SECONDARY WALL THICKENING PROMOTING 3, Protein SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 1, SECONDARY WALL-ASSOCIATED NAC DOMAIN 1, SND1				IHOP 25434
				NCBI Acc. NM_103011
Description Transcriptional activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening and lignification of sclerenchymatous fibers and secondary xylem vessels (tracheary elements). Seems to repress the secondary cell wall thickening of xylary fibers. May also regulates the secondary cell wall lignification of other t				JASPAR None Available

-PBM Motif Data for SND1
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)				PWM Save
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)				Top Kmer TTACGCAA E.S. 0.496 TTGCGTAA E.S. 0.496
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)				PWM Save
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)				Top Kmer GT.GCGTAA E.S. 0.495 TTACGC.AC E.S. 0.495
Downloads Download the zip of all SND1 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.

-SND1 Datasets
Clone	Clone Type	Last Modified	Save	View
SND1	DNA binding domain only	2016-02-06
SND1 Insert Sequence `1 MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE 51 VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW 101 KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS 151 NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE 201 EKG`
References `Data are analyzed by array designs with AMADID #s 034149, 034150 in Lindemose et al, Nucleic Acids Res. 2014`