-Genomic Data for PBX4 Links
Protein
PBX4
UniPROBE Accession Number
UP00613
Species
Homo sapiens
Domain
Homeobox
Swiss-Prot
Q9BYU1
Name and Synonyms
Name: pre-B-cell leukemia transcription factor 4.
Synonyms:Homeobox protein PBX4, Pre-B-cell leukemia transcription factor 4
IHOP
103235
NCBI RefSeq
NP_079521
Description
This gene encodes a member of the pre-B cell leukemia transcription factor family. These proteins are homeobox proteins that play critical roles in embryonic development and cellular differentiation both as Hox cofactors and through Hox-independent pathways. The encoded protein contains a homeobox DNA-binding domain, but specific functions of the protein have not been determined. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, May 2011]
JASPAR
None Available
-PBM Motif Data for PBX4_REF_R1
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
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Top Kmer
A..TGACATG E.S. 0.489
CATGTCA..T E.S. 0.489
Downloads
Download the zip of all PBX4_REF PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBM Motif Data for PBX4_REF_R2
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
A..TGACATG E.S. 0.492
CATGTCA..T E.S. 0.492
Downloads
Download the zip of all PBX4_REF PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBM Motif Data for PBX4_R215Q_R2
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
CTAATTAG E.S. 0.486
CTAATTAG E.S. 0.486
Downloads
Download the zip of all PBX4_R215Q PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBM Motif Data for PBX4_R215Q_R1
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
TTAATTAA E.S. 0.464
TTAATTAA E.S. 0.464
Downloads
Download the zip of all PBX4_R215Q PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Download Data for PBX4 (all alleles)
Downloads
Download the zip of all PBX4 PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBX4 Datasets
Clone Clone Type Last Modified Save View
PBX4_REF DNA binding domain only search save
PBX4_REF Insert Sequence
1   STCEAVMTLR SRLLDARRKR RNFSKQATEV LNEYFYSHLN NPYPSEEAKE
51  ELARKGGLTI SQVSNWFGNK RIRYKKNMGK FQEEATIYTG KTA


PBX4_R215Q DNA binding domain only search save
PBX4_R215Q Insert Sequence
1   STCEAVMTLR SRLLDARRKR QNFSKQATEV LNEYFYSHLN NPYPSEEAKE
51  ELARKGGLTI SQVSNWFGNK RIRYKKNMGK FQEEATIYTG KTA


References
Data are analyzed by array designs with AMADID #s 030236, 015681 in Barrera et al., Science 2016


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