-Genomic Data for VENTX Links
Protein
VENTX
UniPROBE Accession Number
UP00624
Species
Homo sapiens
Domain
Homeobox
Swiss-Prot
O95231
Name and Synonyms
Name: homeobox protein VENTX.
Synonyms:Homeobox protein VENTX, HPX42B, MGC119910, MGC119911, NA88A, VENT homeobox homolog, VENT-like homeobox protein 2, VENTX2
IHOP
97996
NCBI RefSeq
NP_055283
Description
This gene encodes a member of the Vent family of homeodomain proteins. The encoded protein may function as a transcriptional repressor and be involved in mesodermal patterning and hemopoietic stem cell maintenance. Multiple pseudogenes exist for this gene. A transcribed pseudogene located on chromosome X may lead to antigen production in certain melanomas. [provided by RefSeq, Jul 2008]
JASPAR
None Available
-PBM Motif Data for VENTX_REF_R1
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
G.TAATTA.C E.S. 0.496
G.TAATTA.C E.S. 0.496
Downloads
Download the zip of all VENTX_REF PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBM Motif Data for VENTX_E101K_R1
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
G.TAATTA.C E.S. 0.487
G.TAATTA.C E.S. 0.487
Downloads
Download the zip of all VENTX_E101K PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBM Motif Data for VENTX_R143C_R1
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
ATA..ATATG E.S. 0.452
CATAT..TAT E.S. 0.452
Downloads
Download the zip of all VENTX_R143C PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Download Data for VENTX (all alleles)
Downloads
Download the zip of all VENTX PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-VENTX Datasets
Clone Clone Type Last Modified Save View
VENTX_REF DNA binding domain only search save
VENTX_REF Insert Sequence
1   MAGLSKEPNT LRAPRVRTAF TMEQVRTLEG VFQHHQYLSP LERKRLAREM
51  QLSEVQIKTW FQNRRMKHKR QMQDPQLHSP FSGSL


VENTX_E101K DNA binding domain only search save
VENTX_E101K Insert Sequence
1   MAGLSKEPNT LRAPRVRTAF TMKQVRTLEG VFQHHQYLSP LERKRLAREM
51  QLSEVQIKTW FQNRRMKHKR QMQDPQLHSP FSGSL


VENTX_R143C DNA binding domain only search save
VENTX_R143C Insert Sequence
1   MAGLSKEPNT LRAPRVRTAF TMEQVRTLEG VFQHHQYLSP LERKRLAREM
51  QLSEVQIKTW FQNRCMKHKR QMQDPQLHSP FSGSL


References
Data are analyzed by array designs with AMADID #s 030236, 015681 in Barrera et al., Science 2016


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