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| -Genomic Data for SAMD1 |
Links |
- Protein
- SAMD1
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- UniPROBE Accession Number
- UP01667
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- Species
- Homo sapiens
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- Domain
- WH
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- Swiss-Prot
- Q6SPF0
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- Name and Synonyms
- Name: Atherin.
Synonyms:Sterile alpha motif domain-containing protein 1, SAM domain containing protein 1
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- IHOP
- Null
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- NCBI RefSeq
- NP_612361.1
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- Description
- Atherin or SAMD1 may play a role in atherogenesis by immobilizing LDL in the atherial wall
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- JASPAR
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Null
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| -PBM Motif Data for SAMD1-WH2_rep2 |
- PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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- PWM
- Save
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- Top Kmer
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GCGCGCGC E.S. 0.499
GCGCGCGC E.S. 0.499
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- Downloads
-
Download the zip
of all SAMD1-WH2_rep2 PBM files
or view the downloads directory
for individual files.
Please note that the files which include probe sequence data are protected by an academic research use license,
which can be viewed here.
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| -PBM Motif Data for SAMD1-WH2_rep1 |
- PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
-
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- PWM
- Save
|
- Top Kmer
-
GCGCGCGC E.S. 0.499
GCGCGCGC E.S. 0.499
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- Downloads
-
Download the zip
of all SAMD1-WH2_rep1 PBM files
or view the downloads directory
for individual files.
Please note that the files which include probe sequence data are protected by an academic research use license,
which can be viewed here.
|
| -PBM Motif Data for SAMD1-WH1_rep1 |
- PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
-
|
- PWM
- Save
|
- Top Kmer
-
GCGCGCGC E.S. 0.500
GCGCGCGC E.S. 0.500
|
- Downloads
-
Download the zip
of all SAMD1-WH1_rep1 PBM files
or view the downloads directory
for individual files.
Please note that the files which include probe sequence data are protected by an academic research use license,
which can be viewed here.
|
| -PBM Motif Data for SAMD1-WH1_rep2 |
- PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
-
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- PWM
- Save
|
- Top Kmer
-
A.G.GCGCGC E.S. 0.498
GCGCGC.C.T E.S. 0.498
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- Downloads
-
Download the zip
of all SAMD1-WH1_rep2 PBM files
or view the downloads directory
for individual files.
Please note that the files which include probe sequence data are protected by an academic research use license,
which can be viewed here.
|
| -SAMD1 Datasets |
| Complex Name |
Save |
View |
| SAMD1-WH2 |
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| Run name |
PBM version |
Save |
View |
| SAMD1-WH2_rep2 | AMADID # 030236 |
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| SAMD1-WH2_rep1 | AMADID # 030236 |
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| Complex Name |
Save |
View |
| SAMD1-WH1 |
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| Run name |
PBM version |
Save |
View |
| SAMD1-WH1_rep1 | AMADID # 030236 |
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| SAMD1-WH1_rep2 | AMADID # 030236 |
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| Gene |
Clone Type |
Last Modified |
Save |
View |
| SAMD1-WH2 |
Not full length |
2021-06-22 |
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- SAMD1-WH2 Insert Sequence
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1 SPHYQEWILD TIDSLRSRKA RPDLERICRM VRRRHGPEPE RTRAELEKLI
51 QQRAVLRVSY KGSISYRNAA RVQPPRRGAT PPA
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- References
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Data are analyzed by array design with AMADID # 030236 in Stielow et al., Science Advances 2021
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