-Genomic Data for CEH-22 Links
Protein
UniPROBE Accession Number
UP00396
Species
C. elegans
Domain
Homeobox
Swiss-Prot
P41936
Name and Synonyms
Name: Homeobox protein ceh-22.
Synonyms:"F29F11.5, Homeobox protein ceh-22"
IHOP
44473
NCBI RefSeq
NP_505732
Description
C.Elegans Homeobox
JASPAR
None Available
-PBM Motif Data for CEH-22
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
CCACTTGA
PWM
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Top Kmer
CCACTTGA E.S. 0.495
TCAAGTGG E.S. 0.495
PBM-Derived DNA Binding Site Motif (BEEML-PBM) (AMADID # 015681)
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PWM
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Consensus
NNVYACTYVW
WBRAGTRBNN
PBM-Derived DNA Binding Site Motif (BEEML-PBM) (AMADID # 016060)
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PWM
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Consensus
NNVYACTYVW
WBRAGTRBNN
Downloads
Download the zip of all CEH-22 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for CEH-22 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=396&sourceDB=uniprobe

-CEH-22 Datasets
Gene Clone Type Last Modified Save View
CEH-22 Full length clone 2014-08-22 search save
CEH-22 Insert Sequence
1    MFNVSALAAA TPSIASVSSV ASPSEQHGLS TSVGVGVNDT TSRTGDGGAA
51   SSASSASAAP QQQSQSALHN KLEAKWDTLL PTDTNLQCST WPDSIPLLAG
101  YSATPTFSFD PCTYGSYDPS AYFASNGIAG SMYTLPDQFP RSENDMLDNS
151  NTSNGNKSDK DGIKLEDEDE ILEDEENDEE DDGTGKRKKR KRRVLFTKAQ
201  TYELERRFRS QKYLSAPERE ALAMQIRLTP TQVKIWFQNH RYKTKKSHTD
251  KPINAALLTT MPNAFSSQST AASFPTRAMP IPMLVRDSSA RSSDISSTSP
301  YTVAFGSANS GYLPTPSAYL PATSGYFSNG PSAASSYMTN TQWWPS


References
Data are analyzed by array design with AMADID # in Berger et al., Nat Biotech 2006


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