-Genomic Data for Ubx Links
Protein
UniPROBE Accession Number
UP00512
Species
Drosophila melanogaster
Domain
Homeobox
Name and Synonyms
Name: Ultrabithorax.
Synonyms:abx, bx, bx[D], BX-C, bxd, bxd[D], bxl, Bxl, Cbx, CG10388, Dmel\CG10388, DmUbx, Dm Ubx, DUbx, Hm, Homeotic protein ultrabithorax, l(3)89Eb, pbx, Uab, ubx, UBx, UBX, Ubx1b
Description
Ubx is a sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. This homeotic protein controls development of the cells in the posterior thoracic and first abdominal segments. It activates the synthesis of the decapentaplegic (DPP) growth factor.
-PBM Motif Data for Ubx
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
GGTAATTA
PWM
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Top Kmer
GGTAATTA E.S. 0.497
TAATTACC E.S. 0.497
PBM-Derived DNA Binding Site Motif (BEEML-PBM)
NNHHATWWNN
PWM
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Consensus
NNHHATWWNN
NNWWATDDNN
Downloads
Download the zip of all Ubx PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-Ubx Datasets
Gene Clone Type Last Modified Save View
Ubx DNA binding domain only 2014-08-13 search save
Ubx Insert Sequence
1   KRYSESLAGS LLPDWLGTNG LRRRGRQTYT RYQTLELEKE FHTNHYLTRR
51  RRIEMAHALC LTERQIKIWF QNRRMKLKKE IQAIKELNEQ EKQAQ



References
Data are analyzed by array design with AMADID # 015681 in Busser et al., Development 2012


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