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Genomic Data
PBM Motif Data
HLH-4
HLH-2/HLH-4
Interaction Data
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Genomic Data for HLH-4
Links
Gene
hlh-4
Species
$species
Domain
bHLH
IHOP
41526
Swiss-Prot
P34555
UniPROBE Accession Number
$accession_id
Synonyms
T05G5.2, Achaete-scute/HLH
$refseq_designator
NP_499150
Wormbase Protein ID
WP:CE00314
EdgeDB Promoter
Phlh-4
Wormbase Gene ID
WBGene00001951
Description (from
Wormbase
)
none available
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PBM Motif Data for HLH-4
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
Reverse Complement (RC)
PWM
<dd><a href="./downloads/Cell09/HLH-4/HLH-4.pwm">View</a>   <a href="downfile.php?id=369&gene=HLH-4&folder=Cell09&RC=0">Save</a></dd>
Top Kmer
AAAAAAAA E.S. 0.433
TTTTTTTT E.S. 0.433
Downloads
Download the
zip
of all HLH-4 PBM files or view the
downloads directory
for individual files.
-
PBM Motif Data for HLH-2/HLH-4 Heterodimer
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
Reverse Complement (RC)
PWM
View
Top Kmer
A.CACCTGC E.S. 0.499
GCAGGTG.T E.S. 0.499
Downloads
Download the
zip
of all HLH-2/HLH-4 interaction files or view the
downloads directory
for individual files.
-
HLH-4 Datasets
Gene
Homodimerizes
Clone Type
Last Modified
Save
View
hlh-4
No
Full length clone
2016-03-24
HLH-4 Insert Sequence
1 PMVVAKRNAR ERTRVHTVNQ AFLVLKQHLP SLRQFTKRVS KLRILNAAIT
51 YIDTLLKLIQ SSEAVPQSVI SATLGPIVPT PVRAVHKISK PDTVISQPIR
101 PLAPVLPRHE TYLPAPIAAT CAPDHSLVDY RSTFASSLAP PVPMQMPSVF
151 SPQPTFPYMK SLLDYPTYFY QPSTAPPPPP APTAPQSHLI VNNQLVPMPS
201 YQCF
Mutations away from WormBase HLH-4 wildtype:
• Methioinine start not included in insert sequence
HLH-4 Interacts With
Clone Type
Last Modified
Save
View
HLH-2
Full length clone
2008-07-23
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